Cargando…
A General Latent Class Model for Performance Evaluation of Diagnostic Tests in the Absence of a Gold Standard: An Application to Chagas Disease
We propose a new general Bayesian latent class model for evaluation of the performance of multiple diagnostic tests in situations in which no gold standard test exists based on a computationally intensive approach. The modeling represents an interesting and suitable alternative to models with comple...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2012
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3419444/ https://www.ncbi.nlm.nih.gov/pubmed/22919430 http://dx.doi.org/10.1155/2012/487502 |
_version_ | 1782240730893254656 |
---|---|
author | Pereira, Gilberto de Araujo Louzada, Francisco Barbosa, Valdirene de Fátima Ferreira-Silva, Márcia Maria Moraes-Souza, Helio |
author_facet | Pereira, Gilberto de Araujo Louzada, Francisco Barbosa, Valdirene de Fátima Ferreira-Silva, Márcia Maria Moraes-Souza, Helio |
author_sort | Pereira, Gilberto de Araujo |
collection | PubMed |
description | We propose a new general Bayesian latent class model for evaluation of the performance of multiple diagnostic tests in situations in which no gold standard test exists based on a computationally intensive approach. The modeling represents an interesting and suitable alternative to models with complex structures that involve the general case of several conditionally independent diagnostic tests, covariates, and strata with different disease prevalences. The technique of stratifying the population according to different disease prevalence rates does not add further marked complexity to the modeling, but it makes the model more flexible and interpretable. To illustrate the general model proposed, we evaluate the performance of six diagnostic screening tests for Chagas disease considering some epidemiological variables. Serology at the time of donation (negative, positive, inconclusive) was considered as a factor of stratification in the model. The general model with stratification of the population performed better in comparison with its concurrents without stratification. The group formed by the testing laboratory Biomanguinhos FIOCRUZ-kit (c-ELISA and rec-ELISA) is the best option in the confirmation process by presenting false-negative rate of 0.0002% from the serial scheme. We are 100% sure that the donor is healthy when these two tests have negative results and he is chagasic when they have positive results. |
format | Online Article Text |
id | pubmed-3419444 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-34194442012-08-23 A General Latent Class Model for Performance Evaluation of Diagnostic Tests in the Absence of a Gold Standard: An Application to Chagas Disease Pereira, Gilberto de Araujo Louzada, Francisco Barbosa, Valdirene de Fátima Ferreira-Silva, Márcia Maria Moraes-Souza, Helio Comput Math Methods Med Research Article We propose a new general Bayesian latent class model for evaluation of the performance of multiple diagnostic tests in situations in which no gold standard test exists based on a computationally intensive approach. The modeling represents an interesting and suitable alternative to models with complex structures that involve the general case of several conditionally independent diagnostic tests, covariates, and strata with different disease prevalences. The technique of stratifying the population according to different disease prevalence rates does not add further marked complexity to the modeling, but it makes the model more flexible and interpretable. To illustrate the general model proposed, we evaluate the performance of six diagnostic screening tests for Chagas disease considering some epidemiological variables. Serology at the time of donation (negative, positive, inconclusive) was considered as a factor of stratification in the model. The general model with stratification of the population performed better in comparison with its concurrents without stratification. The group formed by the testing laboratory Biomanguinhos FIOCRUZ-kit (c-ELISA and rec-ELISA) is the best option in the confirmation process by presenting false-negative rate of 0.0002% from the serial scheme. We are 100% sure that the donor is healthy when these two tests have negative results and he is chagasic when they have positive results. Hindawi Publishing Corporation 2012 2012-07-31 /pmc/articles/PMC3419444/ /pubmed/22919430 http://dx.doi.org/10.1155/2012/487502 Text en Copyright © 2012 Gilberto de Araujo Pereira et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Pereira, Gilberto de Araujo Louzada, Francisco Barbosa, Valdirene de Fátima Ferreira-Silva, Márcia Maria Moraes-Souza, Helio A General Latent Class Model for Performance Evaluation of Diagnostic Tests in the Absence of a Gold Standard: An Application to Chagas Disease |
title | A General Latent Class Model for Performance Evaluation of Diagnostic Tests in the Absence of a Gold Standard: An Application to Chagas Disease |
title_full | A General Latent Class Model for Performance Evaluation of Diagnostic Tests in the Absence of a Gold Standard: An Application to Chagas Disease |
title_fullStr | A General Latent Class Model for Performance Evaluation of Diagnostic Tests in the Absence of a Gold Standard: An Application to Chagas Disease |
title_full_unstemmed | A General Latent Class Model for Performance Evaluation of Diagnostic Tests in the Absence of a Gold Standard: An Application to Chagas Disease |
title_short | A General Latent Class Model for Performance Evaluation of Diagnostic Tests in the Absence of a Gold Standard: An Application to Chagas Disease |
title_sort | general latent class model for performance evaluation of diagnostic tests in the absence of a gold standard: an application to chagas disease |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3419444/ https://www.ncbi.nlm.nih.gov/pubmed/22919430 http://dx.doi.org/10.1155/2012/487502 |
work_keys_str_mv | AT pereiragilbertodearaujo agenerallatentclassmodelforperformanceevaluationofdiagnostictestsintheabsenceofagoldstandardanapplicationtochagasdisease AT louzadafrancisco agenerallatentclassmodelforperformanceevaluationofdiagnostictestsintheabsenceofagoldstandardanapplicationtochagasdisease AT barbosavaldirenedefatima agenerallatentclassmodelforperformanceevaluationofdiagnostictestsintheabsenceofagoldstandardanapplicationtochagasdisease AT ferreirasilvamarciamaria agenerallatentclassmodelforperformanceevaluationofdiagnostictestsintheabsenceofagoldstandardanapplicationtochagasdisease AT moraessouzahelio agenerallatentclassmodelforperformanceevaluationofdiagnostictestsintheabsenceofagoldstandardanapplicationtochagasdisease AT pereiragilbertodearaujo generallatentclassmodelforperformanceevaluationofdiagnostictestsintheabsenceofagoldstandardanapplicationtochagasdisease AT louzadafrancisco generallatentclassmodelforperformanceevaluationofdiagnostictestsintheabsenceofagoldstandardanapplicationtochagasdisease AT barbosavaldirenedefatima generallatentclassmodelforperformanceevaluationofdiagnostictestsintheabsenceofagoldstandardanapplicationtochagasdisease AT ferreirasilvamarciamaria generallatentclassmodelforperformanceevaluationofdiagnostictestsintheabsenceofagoldstandardanapplicationtochagasdisease AT moraessouzahelio generallatentclassmodelforperformanceevaluationofdiagnostictestsintheabsenceofagoldstandardanapplicationtochagasdisease |