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Assessing the Relative Stability of Dimer Interfaces in G Protein-Coupled Receptors
Considerable evidence has accumulated in recent years suggesting that G protein-coupled receptors (GPCRs) associate in the plasma membrane to form homo- and/or heteromers. Nevertheless, the stoichiometry, fraction and lifetime of such receptor complexes in living cells remain topics of intense debat...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3420924/ https://www.ncbi.nlm.nih.gov/pubmed/22916005 http://dx.doi.org/10.1371/journal.pcbi.1002649 |
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author | Johnston, Jennifer M. Wang, Hao Provasi, Davide Filizola, Marta |
author_facet | Johnston, Jennifer M. Wang, Hao Provasi, Davide Filizola, Marta |
author_sort | Johnston, Jennifer M. |
collection | PubMed |
description | Considerable evidence has accumulated in recent years suggesting that G protein-coupled receptors (GPCRs) associate in the plasma membrane to form homo- and/or heteromers. Nevertheless, the stoichiometry, fraction and lifetime of such receptor complexes in living cells remain topics of intense debate. Motivated by experimental data suggesting differing stabilities for homomers of the cognate human β1- and β2-adrenergic receptors, we have carried out approximately 160 microseconds of biased molecular dynamics simulations to calculate the dimerization free energy of crystal structure-based models of these receptors, interacting at two interfaces that have often been implicated in GPCR association under physiological conditions. Specifically, results are presented for simulations of coarse-grained (MARTINI-based) and atomistic representations of each receptor, in homodimeric configurations with either transmembrane helices TM1/H8 or TM4/3 at the interface, in an explicit lipid bilayer. Our results support a definite contribution to the relative stability of GPCR dimers from both interface sequence and configuration. We conclude that β1- and β2-adrenergic receptor homodimers with TM1/H8 at the interface are more stable than those involving TM4/3, and that this might be reconciled with experimental studies by considering a model of oligomerization in which more stable TM1 homodimers diffuse through the membrane, transiently interacting with other protomers at interfaces involving other TM helices. |
format | Online Article Text |
id | pubmed-3420924 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-34209242012-08-22 Assessing the Relative Stability of Dimer Interfaces in G Protein-Coupled Receptors Johnston, Jennifer M. Wang, Hao Provasi, Davide Filizola, Marta PLoS Comput Biol Research Article Considerable evidence has accumulated in recent years suggesting that G protein-coupled receptors (GPCRs) associate in the plasma membrane to form homo- and/or heteromers. Nevertheless, the stoichiometry, fraction and lifetime of such receptor complexes in living cells remain topics of intense debate. Motivated by experimental data suggesting differing stabilities for homomers of the cognate human β1- and β2-adrenergic receptors, we have carried out approximately 160 microseconds of biased molecular dynamics simulations to calculate the dimerization free energy of crystal structure-based models of these receptors, interacting at two interfaces that have often been implicated in GPCR association under physiological conditions. Specifically, results are presented for simulations of coarse-grained (MARTINI-based) and atomistic representations of each receptor, in homodimeric configurations with either transmembrane helices TM1/H8 or TM4/3 at the interface, in an explicit lipid bilayer. Our results support a definite contribution to the relative stability of GPCR dimers from both interface sequence and configuration. We conclude that β1- and β2-adrenergic receptor homodimers with TM1/H8 at the interface are more stable than those involving TM4/3, and that this might be reconciled with experimental studies by considering a model of oligomerization in which more stable TM1 homodimers diffuse through the membrane, transiently interacting with other protomers at interfaces involving other TM helices. Public Library of Science 2012-08-16 /pmc/articles/PMC3420924/ /pubmed/22916005 http://dx.doi.org/10.1371/journal.pcbi.1002649 Text en © 2012 Johnston et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Johnston, Jennifer M. Wang, Hao Provasi, Davide Filizola, Marta Assessing the Relative Stability of Dimer Interfaces in G Protein-Coupled Receptors |
title | Assessing the Relative Stability of Dimer Interfaces in G Protein-Coupled Receptors |
title_full | Assessing the Relative Stability of Dimer Interfaces in G Protein-Coupled Receptors |
title_fullStr | Assessing the Relative Stability of Dimer Interfaces in G Protein-Coupled Receptors |
title_full_unstemmed | Assessing the Relative Stability of Dimer Interfaces in G Protein-Coupled Receptors |
title_short | Assessing the Relative Stability of Dimer Interfaces in G Protein-Coupled Receptors |
title_sort | assessing the relative stability of dimer interfaces in g protein-coupled receptors |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3420924/ https://www.ncbi.nlm.nih.gov/pubmed/22916005 http://dx.doi.org/10.1371/journal.pcbi.1002649 |
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