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Characterization and prediction of the binding site in DNA-binding proteins: improvement of accuracy by combining residue composition, evolutionary conservation and structural parameters
We present a set of four parameters that in combination can predict DNA-binding residues on protein structures to a high degree of accuracy. These are the number of evolutionary conserved residues (N(cons)) and their spatial clustering (ρ(e)), hydrogen bond donor capability (D(p)) and residue propen...
Autores principales: | Dey, Sucharita, Pal, Arumay, Guharoy, Mainak, Sonavane, Shrihari, Chakrabarti, Pinak |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3424558/ https://www.ncbi.nlm.nih.gov/pubmed/22641851 http://dx.doi.org/10.1093/nar/gks405 |
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