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Microbial Biogeography of Arctic Streams: Exploring Influences of Lithology and Habitat
Terminal restriction fragment length polymorphism and 16S rRNA gene sequencing were used to explore the community composition of bacterial communities in biofilms on sediments (epipssamon) and rocks (epilithon) in stream reaches that drain watersheds with contrasting lithologies in the Noatak Nation...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Research Foundation
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3426929/ https://www.ncbi.nlm.nih.gov/pubmed/22936932 http://dx.doi.org/10.3389/fmicb.2012.00309 |
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author | Larouche, Julia R. Bowden, William B. Giordano, Rosanna Flinn, Michael B. Crump, Byron C. |
author_facet | Larouche, Julia R. Bowden, William B. Giordano, Rosanna Flinn, Michael B. Crump, Byron C. |
author_sort | Larouche, Julia R. |
collection | PubMed |
description | Terminal restriction fragment length polymorphism and 16S rRNA gene sequencing were used to explore the community composition of bacterial communities in biofilms on sediments (epipssamon) and rocks (epilithon) in stream reaches that drain watersheds with contrasting lithologies in the Noatak National Preserve, Alaska. Bacterial community composition varied primarily by stream habitat and secondarily by lithology. Positive correlations were detected between bacterial community structure and nutrients, base cations, and dissolved organic carbon. Our results showed significant differences at the stream habitat, between epipssamon and epilithon bacterial communities, which we expected. Our results also showed significant differences at the landscape scale that could be related to different lithologies and associated stream biogeochemistry. These results provide insight into the bacterial community composition of little known and pristine arctic stream ecosystems and illustrate how differences in the lithology, soils, and vegetation community of the terrestrial environment interact to influence stream bacterial taxonomic richness and composition. |
format | Online Article Text |
id | pubmed-3426929 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Frontiers Research Foundation |
record_format | MEDLINE/PubMed |
spelling | pubmed-34269292012-08-30 Microbial Biogeography of Arctic Streams: Exploring Influences of Lithology and Habitat Larouche, Julia R. Bowden, William B. Giordano, Rosanna Flinn, Michael B. Crump, Byron C. Front Microbiol Microbiology Terminal restriction fragment length polymorphism and 16S rRNA gene sequencing were used to explore the community composition of bacterial communities in biofilms on sediments (epipssamon) and rocks (epilithon) in stream reaches that drain watersheds with contrasting lithologies in the Noatak National Preserve, Alaska. Bacterial community composition varied primarily by stream habitat and secondarily by lithology. Positive correlations were detected between bacterial community structure and nutrients, base cations, and dissolved organic carbon. Our results showed significant differences at the stream habitat, between epipssamon and epilithon bacterial communities, which we expected. Our results also showed significant differences at the landscape scale that could be related to different lithologies and associated stream biogeochemistry. These results provide insight into the bacterial community composition of little known and pristine arctic stream ecosystems and illustrate how differences in the lithology, soils, and vegetation community of the terrestrial environment interact to influence stream bacterial taxonomic richness and composition. Frontiers Research Foundation 2012-08-24 /pmc/articles/PMC3426929/ /pubmed/22936932 http://dx.doi.org/10.3389/fmicb.2012.00309 Text en Copyright © 2012 Larouche, Bowden, Giordano, Flinn and Crump. http://www.frontiersin.org/licenseagreement This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in other forums, provided the original authors and source are credited and subject to any copyright notices concerning any third-party graphics etc. |
spellingShingle | Microbiology Larouche, Julia R. Bowden, William B. Giordano, Rosanna Flinn, Michael B. Crump, Byron C. Microbial Biogeography of Arctic Streams: Exploring Influences of Lithology and Habitat |
title | Microbial Biogeography of Arctic Streams: Exploring Influences of Lithology and Habitat |
title_full | Microbial Biogeography of Arctic Streams: Exploring Influences of Lithology and Habitat |
title_fullStr | Microbial Biogeography of Arctic Streams: Exploring Influences of Lithology and Habitat |
title_full_unstemmed | Microbial Biogeography of Arctic Streams: Exploring Influences of Lithology and Habitat |
title_short | Microbial Biogeography of Arctic Streams: Exploring Influences of Lithology and Habitat |
title_sort | microbial biogeography of arctic streams: exploring influences of lithology and habitat |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3426929/ https://www.ncbi.nlm.nih.gov/pubmed/22936932 http://dx.doi.org/10.3389/fmicb.2012.00309 |
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