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Microbial Biogeography of Arctic Streams: Exploring Influences of Lithology and Habitat

Terminal restriction fragment length polymorphism and 16S rRNA gene sequencing were used to explore the community composition of bacterial communities in biofilms on sediments (epipssamon) and rocks (epilithon) in stream reaches that drain watersheds with contrasting lithologies in the Noatak Nation...

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Autores principales: Larouche, Julia R., Bowden, William B., Giordano, Rosanna, Flinn, Michael B., Crump, Byron C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Research Foundation 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3426929/
https://www.ncbi.nlm.nih.gov/pubmed/22936932
http://dx.doi.org/10.3389/fmicb.2012.00309
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author Larouche, Julia R.
Bowden, William B.
Giordano, Rosanna
Flinn, Michael B.
Crump, Byron C.
author_facet Larouche, Julia R.
Bowden, William B.
Giordano, Rosanna
Flinn, Michael B.
Crump, Byron C.
author_sort Larouche, Julia R.
collection PubMed
description Terminal restriction fragment length polymorphism and 16S rRNA gene sequencing were used to explore the community composition of bacterial communities in biofilms on sediments (epipssamon) and rocks (epilithon) in stream reaches that drain watersheds with contrasting lithologies in the Noatak National Preserve, Alaska. Bacterial community composition varied primarily by stream habitat and secondarily by lithology. Positive correlations were detected between bacterial community structure and nutrients, base cations, and dissolved organic carbon. Our results showed significant differences at the stream habitat, between epipssamon and epilithon bacterial communities, which we expected. Our results also showed significant differences at the landscape scale that could be related to different lithologies and associated stream biogeochemistry. These results provide insight into the bacterial community composition of little known and pristine arctic stream ecosystems and illustrate how differences in the lithology, soils, and vegetation community of the terrestrial environment interact to influence stream bacterial taxonomic richness and composition.
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spelling pubmed-34269292012-08-30 Microbial Biogeography of Arctic Streams: Exploring Influences of Lithology and Habitat Larouche, Julia R. Bowden, William B. Giordano, Rosanna Flinn, Michael B. Crump, Byron C. Front Microbiol Microbiology Terminal restriction fragment length polymorphism and 16S rRNA gene sequencing were used to explore the community composition of bacterial communities in biofilms on sediments (epipssamon) and rocks (epilithon) in stream reaches that drain watersheds with contrasting lithologies in the Noatak National Preserve, Alaska. Bacterial community composition varied primarily by stream habitat and secondarily by lithology. Positive correlations were detected between bacterial community structure and nutrients, base cations, and dissolved organic carbon. Our results showed significant differences at the stream habitat, between epipssamon and epilithon bacterial communities, which we expected. Our results also showed significant differences at the landscape scale that could be related to different lithologies and associated stream biogeochemistry. These results provide insight into the bacterial community composition of little known and pristine arctic stream ecosystems and illustrate how differences in the lithology, soils, and vegetation community of the terrestrial environment interact to influence stream bacterial taxonomic richness and composition. Frontiers Research Foundation 2012-08-24 /pmc/articles/PMC3426929/ /pubmed/22936932 http://dx.doi.org/10.3389/fmicb.2012.00309 Text en Copyright © 2012 Larouche, Bowden, Giordano, Flinn and Crump. http://www.frontiersin.org/licenseagreement This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in other forums, provided the original authors and source are credited and subject to any copyright notices concerning any third-party graphics etc.
spellingShingle Microbiology
Larouche, Julia R.
Bowden, William B.
Giordano, Rosanna
Flinn, Michael B.
Crump, Byron C.
Microbial Biogeography of Arctic Streams: Exploring Influences of Lithology and Habitat
title Microbial Biogeography of Arctic Streams: Exploring Influences of Lithology and Habitat
title_full Microbial Biogeography of Arctic Streams: Exploring Influences of Lithology and Habitat
title_fullStr Microbial Biogeography of Arctic Streams: Exploring Influences of Lithology and Habitat
title_full_unstemmed Microbial Biogeography of Arctic Streams: Exploring Influences of Lithology and Habitat
title_short Microbial Biogeography of Arctic Streams: Exploring Influences of Lithology and Habitat
title_sort microbial biogeography of arctic streams: exploring influences of lithology and habitat
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3426929/
https://www.ncbi.nlm.nih.gov/pubmed/22936932
http://dx.doi.org/10.3389/fmicb.2012.00309
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