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First Korean Case of Robinsoniella peoriensis Bacteremia in a Patient with Aspiration Pneumonia

Robinsoniella peoriensis has recently been identified as a Gram-positive, spore-forming, anaerobic rod originally recovered from swine manure storage pits. To date, 6 cases of R. peoriensis infection have been reported, including 2 cases of bacteremia, 1 of abdominal fluid collection, and 3 of wound...

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Autores principales: Jeon, Yongbum, Kim, Taek Soo, Kim, Hong Bin, Park, Kyoung Un, Song, Junghan, Kim, Eui Chong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Korean Society for Laboratory Medicine 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3427827/
https://www.ncbi.nlm.nih.gov/pubmed/22950075
http://dx.doi.org/10.3343/alm.2012.32.5.370
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author Jeon, Yongbum
Kim, Taek Soo
Kim, Hong Bin
Park, Kyoung Un
Song, Junghan
Kim, Eui Chong
author_facet Jeon, Yongbum
Kim, Taek Soo
Kim, Hong Bin
Park, Kyoung Un
Song, Junghan
Kim, Eui Chong
author_sort Jeon, Yongbum
collection PubMed
description Robinsoniella peoriensis has recently been identified as a Gram-positive, spore-forming, anaerobic rod originally recovered from swine manure storage pits. To date, 6 cases of R. peoriensis infection have been reported, including 2 cases of bacteremia, 1 of abdominal fluid collection, and 3 of wound infection. In the present study, we report a 76-yr-old man with R. peoriensis bacteremia who developed aspiration pneumonia. Gram staining of a purified colony revealed Gram-positive, rod-shaped bacteria. Biochemical identification using API 20 A (bioMérieux, France) indicated presence of Clostridium spp. We performed both 500-bp and full-gene sequencing of 16S rRNA of the isolate. The sequence was analyzed with MicroSeq ID 16S rRNA Library v2.0 (Applied Biosystems, USA), GenBank Basic Local Alignment Search Tool (BLAST) (http://www.ncbi.nlm.nih.gov/genbank), and EzTaxon database v2.1 (http://www.eztaxon.org). The 500-bp 16S rRNA sequence of the blood culture isolate showed 99.16-99.79% similarity with R. peoriensis and the full-gene 16S rRNA sequence showed 98.87-99.50% similarity with R. peoriensis. The organism was confirmed as R. peoriensis by using all of the mentioned databases except for MicroSeq, which did not include the RNA sequence of this bacterium. This case suggests that identification of R. peoriensis might be challenging in clinical laboratories with no access to molecular methods, as certain commercial identification systems may not identify, or may misidentify, this organism. To the best of our knowledge, this is the first report of the isolation of R. peoriensis in Korea.
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spelling pubmed-34278272012-09-05 First Korean Case of Robinsoniella peoriensis Bacteremia in a Patient with Aspiration Pneumonia Jeon, Yongbum Kim, Taek Soo Kim, Hong Bin Park, Kyoung Un Song, Junghan Kim, Eui Chong Ann Lab Med Case Report Robinsoniella peoriensis has recently been identified as a Gram-positive, spore-forming, anaerobic rod originally recovered from swine manure storage pits. To date, 6 cases of R. peoriensis infection have been reported, including 2 cases of bacteremia, 1 of abdominal fluid collection, and 3 of wound infection. In the present study, we report a 76-yr-old man with R. peoriensis bacteremia who developed aspiration pneumonia. Gram staining of a purified colony revealed Gram-positive, rod-shaped bacteria. Biochemical identification using API 20 A (bioMérieux, France) indicated presence of Clostridium spp. We performed both 500-bp and full-gene sequencing of 16S rRNA of the isolate. The sequence was analyzed with MicroSeq ID 16S rRNA Library v2.0 (Applied Biosystems, USA), GenBank Basic Local Alignment Search Tool (BLAST) (http://www.ncbi.nlm.nih.gov/genbank), and EzTaxon database v2.1 (http://www.eztaxon.org). The 500-bp 16S rRNA sequence of the blood culture isolate showed 99.16-99.79% similarity with R. peoriensis and the full-gene 16S rRNA sequence showed 98.87-99.50% similarity with R. peoriensis. The organism was confirmed as R. peoriensis by using all of the mentioned databases except for MicroSeq, which did not include the RNA sequence of this bacterium. This case suggests that identification of R. peoriensis might be challenging in clinical laboratories with no access to molecular methods, as certain commercial identification systems may not identify, or may misidentify, this organism. To the best of our knowledge, this is the first report of the isolation of R. peoriensis in Korea. The Korean Society for Laboratory Medicine 2012-09 2012-08-13 /pmc/articles/PMC3427827/ /pubmed/22950075 http://dx.doi.org/10.3343/alm.2012.32.5.370 Text en © The Korean Society for Laboratory Medicine. http://creativecommons.org/licenses/by-nc/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Case Report
Jeon, Yongbum
Kim, Taek Soo
Kim, Hong Bin
Park, Kyoung Un
Song, Junghan
Kim, Eui Chong
First Korean Case of Robinsoniella peoriensis Bacteremia in a Patient with Aspiration Pneumonia
title First Korean Case of Robinsoniella peoriensis Bacteremia in a Patient with Aspiration Pneumonia
title_full First Korean Case of Robinsoniella peoriensis Bacteremia in a Patient with Aspiration Pneumonia
title_fullStr First Korean Case of Robinsoniella peoriensis Bacteremia in a Patient with Aspiration Pneumonia
title_full_unstemmed First Korean Case of Robinsoniella peoriensis Bacteremia in a Patient with Aspiration Pneumonia
title_short First Korean Case of Robinsoniella peoriensis Bacteremia in a Patient with Aspiration Pneumonia
title_sort first korean case of robinsoniella peoriensis bacteremia in a patient with aspiration pneumonia
topic Case Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3427827/
https://www.ncbi.nlm.nih.gov/pubmed/22950075
http://dx.doi.org/10.3343/alm.2012.32.5.370
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