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SHARED SPATIAL EFFECTS ON QUANTITATIVE GENETIC PARAMETERS: ACCOUNTING FOR SPATIAL AUTOCORRELATION AND HOME RANGE OVERLAP REDUCES ESTIMATES OF HERITABILITY IN WILD RED DEER
Social structure, limited dispersal, and spatial heterogeneity in resources are ubiquitous in wild vertebrate populations. As a result, relatives share environments as well as genes, and environmental and genetic sources of similarity between individuals are potentially confounded. Quantitative gene...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Blackwell Publishing Inc
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3437482/ https://www.ncbi.nlm.nih.gov/pubmed/22834741 http://dx.doi.org/10.1111/j.1558-5646.2012.01620.x |
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author | Stopher, Katie V Walling, Craig A Morris, Alison Guinness, Fiona E Clutton-Brock, Tim H Pemberton, Josephine M Nussey, Daniel H |
author_facet | Stopher, Katie V Walling, Craig A Morris, Alison Guinness, Fiona E Clutton-Brock, Tim H Pemberton, Josephine M Nussey, Daniel H |
author_sort | Stopher, Katie V |
collection | PubMed |
description | Social structure, limited dispersal, and spatial heterogeneity in resources are ubiquitous in wild vertebrate populations. As a result, relatives share environments as well as genes, and environmental and genetic sources of similarity between individuals are potentially confounded. Quantitative genetic studies in the wild therefore typically account for easily captured shared environmental effects (e.g., parent, nest, or region). Fine-scale spatial effects are likely to be just as important in wild vertebrates, but have been largely ignored. We used data from wild red deer to build “animal models” to estimate additive genetic variance and heritability in four female traits (spring and rut home range size, offspring birth weight, and lifetime breeding success). We then, separately, incorporated spatial autocorrelation and a matrix of home range overlap into these models to estimate the effect of location or shared habitat on phenotypic variation. These terms explained a substantial amount of variation in all traits and their inclusion resulted in reductions in heritability estimates, up to an order of magnitude up for home range size. Our results highlight the potential of multiple covariance matrices to dissect environmental, social, and genetic contributions to phenotypic variation, and the importance of considering fine-scale spatial processes in quantitative genetic studies. |
format | Online Article Text |
id | pubmed-3437482 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Blackwell Publishing Inc |
record_format | MEDLINE/PubMed |
spelling | pubmed-34374822012-09-10 SHARED SPATIAL EFFECTS ON QUANTITATIVE GENETIC PARAMETERS: ACCOUNTING FOR SPATIAL AUTOCORRELATION AND HOME RANGE OVERLAP REDUCES ESTIMATES OF HERITABILITY IN WILD RED DEER Stopher, Katie V Walling, Craig A Morris, Alison Guinness, Fiona E Clutton-Brock, Tim H Pemberton, Josephine M Nussey, Daniel H Evolution Original Articles Social structure, limited dispersal, and spatial heterogeneity in resources are ubiquitous in wild vertebrate populations. As a result, relatives share environments as well as genes, and environmental and genetic sources of similarity between individuals are potentially confounded. Quantitative genetic studies in the wild therefore typically account for easily captured shared environmental effects (e.g., parent, nest, or region). Fine-scale spatial effects are likely to be just as important in wild vertebrates, but have been largely ignored. We used data from wild red deer to build “animal models” to estimate additive genetic variance and heritability in four female traits (spring and rut home range size, offspring birth weight, and lifetime breeding success). We then, separately, incorporated spatial autocorrelation and a matrix of home range overlap into these models to estimate the effect of location or shared habitat on phenotypic variation. These terms explained a substantial amount of variation in all traits and their inclusion resulted in reductions in heritability estimates, up to an order of magnitude up for home range size. Our results highlight the potential of multiple covariance matrices to dissect environmental, social, and genetic contributions to phenotypic variation, and the importance of considering fine-scale spatial processes in quantitative genetic studies. Blackwell Publishing Inc 2012-08 /pmc/articles/PMC3437482/ /pubmed/22834741 http://dx.doi.org/10.1111/j.1558-5646.2012.01620.x Text en © 2012 The Author(s). Evolution© 2012 The Society for the Study of Evolution. http://creativecommons.org/licenses/by/2.5/ Re-use of this article is permitted in accordance with the Creative Commons Deed, Attribution 2.5, which does not permit commercial exploitation. |
spellingShingle | Original Articles Stopher, Katie V Walling, Craig A Morris, Alison Guinness, Fiona E Clutton-Brock, Tim H Pemberton, Josephine M Nussey, Daniel H SHARED SPATIAL EFFECTS ON QUANTITATIVE GENETIC PARAMETERS: ACCOUNTING FOR SPATIAL AUTOCORRELATION AND HOME RANGE OVERLAP REDUCES ESTIMATES OF HERITABILITY IN WILD RED DEER |
title | SHARED SPATIAL EFFECTS ON QUANTITATIVE GENETIC PARAMETERS: ACCOUNTING FOR SPATIAL AUTOCORRELATION AND HOME RANGE OVERLAP REDUCES ESTIMATES OF HERITABILITY IN WILD RED DEER |
title_full | SHARED SPATIAL EFFECTS ON QUANTITATIVE GENETIC PARAMETERS: ACCOUNTING FOR SPATIAL AUTOCORRELATION AND HOME RANGE OVERLAP REDUCES ESTIMATES OF HERITABILITY IN WILD RED DEER |
title_fullStr | SHARED SPATIAL EFFECTS ON QUANTITATIVE GENETIC PARAMETERS: ACCOUNTING FOR SPATIAL AUTOCORRELATION AND HOME RANGE OVERLAP REDUCES ESTIMATES OF HERITABILITY IN WILD RED DEER |
title_full_unstemmed | SHARED SPATIAL EFFECTS ON QUANTITATIVE GENETIC PARAMETERS: ACCOUNTING FOR SPATIAL AUTOCORRELATION AND HOME RANGE OVERLAP REDUCES ESTIMATES OF HERITABILITY IN WILD RED DEER |
title_short | SHARED SPATIAL EFFECTS ON QUANTITATIVE GENETIC PARAMETERS: ACCOUNTING FOR SPATIAL AUTOCORRELATION AND HOME RANGE OVERLAP REDUCES ESTIMATES OF HERITABILITY IN WILD RED DEER |
title_sort | shared spatial effects on quantitative genetic parameters: accounting for spatial autocorrelation and home range overlap reduces estimates of heritability in wild red deer |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3437482/ https://www.ncbi.nlm.nih.gov/pubmed/22834741 http://dx.doi.org/10.1111/j.1558-5646.2012.01620.x |
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