OME Remote Objects (OMERO): a flexible, model-driven data management system for experimental biology

Data-intensive research depends on tools that manage multi-dimensional, heterogeneous data sets. We have built OME Remote Objects (OMERO), a software platform that enables access to and use of a wide range of biological data. OMERO uses a server-based middleware application to provide a unified inte...

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Detalles Bibliográficos
Autores principales: Allan, Chris, Burel, Jean-Marie, Moore, Josh, Blackburn, Colin, Linkert, Melissa, Loynton, Scott, MacDonald, Donald, Moore, William J., Neves, Carlos, Patterson, Andrew, Porter, Michael, Tarkowska, Aleksandra, Loranger, Brian, Avondo, Jerome, Lagerstedt, Ingvar, Lianas, Luca, Leo, Simone, Hands, Katherine, Hay, Ron T., Patwardhan, Ardan, Best, Christoph, Kleywegt, Gerard J., Zanetti, Gianluigi, Swedlow, Jason R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2012
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3437820/
https://www.ncbi.nlm.nih.gov/pubmed/22373911
http://dx.doi.org/10.1038/nmeth.1896
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author Allan, Chris
Burel, Jean-Marie
Moore, Josh
Blackburn, Colin
Linkert, Melissa
Loynton, Scott
MacDonald, Donald
Moore, William J.
Neves, Carlos
Patterson, Andrew
Porter, Michael
Tarkowska, Aleksandra
Loranger, Brian
Avondo, Jerome
Lagerstedt, Ingvar
Lianas, Luca
Leo, Simone
Hands, Katherine
Hay, Ron T.
Patwardhan, Ardan
Best, Christoph
Kleywegt, Gerard J.
Zanetti, Gianluigi
Swedlow, Jason R.
author_facet Allan, Chris
Burel, Jean-Marie
Moore, Josh
Blackburn, Colin
Linkert, Melissa
Loynton, Scott
MacDonald, Donald
Moore, William J.
Neves, Carlos
Patterson, Andrew
Porter, Michael
Tarkowska, Aleksandra
Loranger, Brian
Avondo, Jerome
Lagerstedt, Ingvar
Lianas, Luca
Leo, Simone
Hands, Katherine
Hay, Ron T.
Patwardhan, Ardan
Best, Christoph
Kleywegt, Gerard J.
Zanetti, Gianluigi
Swedlow, Jason R.
author_sort Allan, Chris
collection PubMed
description Data-intensive research depends on tools that manage multi-dimensional, heterogeneous data sets. We have built OME Remote Objects (OMERO), a software platform that enables access to and use of a wide range of biological data. OMERO uses a server-based middleware application to provide a unified interface for images, matrices, and tables. OMERO’s design and flexibility have enabled its use for light microscopy, high content screening, electron microscopy, and even non-image genotype data. OMERO is open source software and available at http://openmicroscopy.org.
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spelling pubmed-34378202012-09-10 OME Remote Objects (OMERO): a flexible, model-driven data management system for experimental biology Allan, Chris Burel, Jean-Marie Moore, Josh Blackburn, Colin Linkert, Melissa Loynton, Scott MacDonald, Donald Moore, William J. Neves, Carlos Patterson, Andrew Porter, Michael Tarkowska, Aleksandra Loranger, Brian Avondo, Jerome Lagerstedt, Ingvar Lianas, Luca Leo, Simone Hands, Katherine Hay, Ron T. Patwardhan, Ardan Best, Christoph Kleywegt, Gerard J. Zanetti, Gianluigi Swedlow, Jason R. Nat Methods Article Data-intensive research depends on tools that manage multi-dimensional, heterogeneous data sets. We have built OME Remote Objects (OMERO), a software platform that enables access to and use of a wide range of biological data. OMERO uses a server-based middleware application to provide a unified interface for images, matrices, and tables. OMERO’s design and flexibility have enabled its use for light microscopy, high content screening, electron microscopy, and even non-image genotype data. OMERO is open source software and available at http://openmicroscopy.org. 2012-02-28 /pmc/articles/PMC3437820/ /pubmed/22373911 http://dx.doi.org/10.1038/nmeth.1896 Text en Users may view, print, copy, download and text and data- mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use: http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Allan, Chris
Burel, Jean-Marie
Moore, Josh
Blackburn, Colin
Linkert, Melissa
Loynton, Scott
MacDonald, Donald
Moore, William J.
Neves, Carlos
Patterson, Andrew
Porter, Michael
Tarkowska, Aleksandra
Loranger, Brian
Avondo, Jerome
Lagerstedt, Ingvar
Lianas, Luca
Leo, Simone
Hands, Katherine
Hay, Ron T.
Patwardhan, Ardan
Best, Christoph
Kleywegt, Gerard J.
Zanetti, Gianluigi
Swedlow, Jason R.
OME Remote Objects (OMERO): a flexible, model-driven data management system for experimental biology
title OME Remote Objects (OMERO): a flexible, model-driven data management system for experimental biology
title_full OME Remote Objects (OMERO): a flexible, model-driven data management system for experimental biology
title_fullStr OME Remote Objects (OMERO): a flexible, model-driven data management system for experimental biology
title_full_unstemmed OME Remote Objects (OMERO): a flexible, model-driven data management system for experimental biology
title_short OME Remote Objects (OMERO): a flexible, model-driven data management system for experimental biology
title_sort ome remote objects (omero): a flexible, model-driven data management system for experimental biology
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3437820/
https://www.ncbi.nlm.nih.gov/pubmed/22373911
http://dx.doi.org/10.1038/nmeth.1896
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