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Updating Our View of Organelle Genome Nucleotide Landscape
Organelle genomes show remarkable variation in architecture and coding content, yet their nucleotide composition is relatively unvarying across the eukaryotic domain, with most having a high adenine and thymine (AT) content. Recent studies, however, have uncovered guanine and cytosine (GC)-rich mito...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Research Foundation
2012
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3438683/ https://www.ncbi.nlm.nih.gov/pubmed/22973299 http://dx.doi.org/10.3389/fgene.2012.00175 |
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author | Smith, David Roy |
author_facet | Smith, David Roy |
author_sort | Smith, David Roy |
collection | PubMed |
description | Organelle genomes show remarkable variation in architecture and coding content, yet their nucleotide composition is relatively unvarying across the eukaryotic domain, with most having a high adenine and thymine (AT) content. Recent studies, however, have uncovered guanine and cytosine (GC)-rich mitochondrial and plastid genomes. These sequences come from a small but eclectic list of species, including certain green plants and animals. Here, I review GC-rich organelle DNAs and the insights they have provided into the evolution of nucleotide landscape. I emphasize that GC-biased mitochondrial and plastid DNAs are more widespread than once thought, sometimes occurring together in the same species, and suggest that the forces biasing their nucleotide content can differ both among and within lineages, and may be associated with specific genome architectural features and life history traits. |
format | Online Article Text |
id | pubmed-3438683 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Frontiers Research Foundation |
record_format | MEDLINE/PubMed |
spelling | pubmed-34386832012-09-12 Updating Our View of Organelle Genome Nucleotide Landscape Smith, David Roy Front Genet Genetics Organelle genomes show remarkable variation in architecture and coding content, yet their nucleotide composition is relatively unvarying across the eukaryotic domain, with most having a high adenine and thymine (AT) content. Recent studies, however, have uncovered guanine and cytosine (GC)-rich mitochondrial and plastid genomes. These sequences come from a small but eclectic list of species, including certain green plants and animals. Here, I review GC-rich organelle DNAs and the insights they have provided into the evolution of nucleotide landscape. I emphasize that GC-biased mitochondrial and plastid DNAs are more widespread than once thought, sometimes occurring together in the same species, and suggest that the forces biasing their nucleotide content can differ both among and within lineages, and may be associated with specific genome architectural features and life history traits. Frontiers Research Foundation 2012-09-11 /pmc/articles/PMC3438683/ /pubmed/22973299 http://dx.doi.org/10.3389/fgene.2012.00175 Text en Copyright © 2012 Smith. http://www.frontiersin.org/licenseagreement This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in other forums, provided the original authors and source are credited and subject to any copyright notices concerning any third-party graphics etc. |
spellingShingle | Genetics Smith, David Roy Updating Our View of Organelle Genome Nucleotide Landscape |
title | Updating Our View of Organelle Genome Nucleotide Landscape |
title_full | Updating Our View of Organelle Genome Nucleotide Landscape |
title_fullStr | Updating Our View of Organelle Genome Nucleotide Landscape |
title_full_unstemmed | Updating Our View of Organelle Genome Nucleotide Landscape |
title_short | Updating Our View of Organelle Genome Nucleotide Landscape |
title_sort | updating our view of organelle genome nucleotide landscape |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3438683/ https://www.ncbi.nlm.nih.gov/pubmed/22973299 http://dx.doi.org/10.3389/fgene.2012.00175 |
work_keys_str_mv | AT smithdavidroy updatingourviewoforganellegenomenucleotidelandscape |