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Voltage-Driven Translocation of DNA through a High Throughput Conical Solid-State Nanopore

Nanopores have become an important tool for molecule detection at single molecular level. With the development of fabrication technology, synthesized solid-state membranes are promising candidate substrates in respect of their exceptional robustness and controllable size and shape. Here, a 30–60 (ti...

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Autores principales: Liu, Quanjun, Wu, Hongwen, Wu, Lingzhi, Xie, Xiao, Kong, Jinglin, Ye, Xiaofeng, Liu, Liping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3454345/
https://www.ncbi.nlm.nih.gov/pubmed/23029365
http://dx.doi.org/10.1371/journal.pone.0046014
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author Liu, Quanjun
Wu, Hongwen
Wu, Lingzhi
Xie, Xiao
Kong, Jinglin
Ye, Xiaofeng
Liu, Liping
author_facet Liu, Quanjun
Wu, Hongwen
Wu, Lingzhi
Xie, Xiao
Kong, Jinglin
Ye, Xiaofeng
Liu, Liping
author_sort Liu, Quanjun
collection PubMed
description Nanopores have become an important tool for molecule detection at single molecular level. With the development of fabrication technology, synthesized solid-state membranes are promising candidate substrates in respect of their exceptional robustness and controllable size and shape. Here, a 30–60 (tip-base) nm conical nanopore fabricated in 100 nm thick silicon nitride (Si(3)N(4)) membrane by focused ion beam (FIB) has been employed for the analysis of λ-DNA translocations at different voltage biases from 200 to 450 mV. The distributions of translocation time and current blockage, as well as the events frequencies as a function of voltage are investigated. Similar to previously published work, the presence and configurations of λ-DNA molecules are characterized, also, we find that greater applied voltages markedly increase the events rate, and stretch the coiled λ-DNA molecules into linear form. However, compared to 6–30 nm ultrathin solid-state nanopores, a threshold voltage of 181 mV is found to be necessary to drive DNA molecules through the nanopore due to conical shape and length of the pore. The speed is slowed down ∼5 times, while the capture radius is ∼2 fold larger. The results show that the large nanopore in thick membrane with an improved stability and throughput also has the ability to detect the molecules at a single molecular level, as well as slows down the velocity of molecules passing through the pore. This work will provide more motivations for the development of nanopores as a Multi-functional sensor for a wide range of biopolymers and nano materials.
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spelling pubmed-34543452012-10-01 Voltage-Driven Translocation of DNA through a High Throughput Conical Solid-State Nanopore Liu, Quanjun Wu, Hongwen Wu, Lingzhi Xie, Xiao Kong, Jinglin Ye, Xiaofeng Liu, Liping PLoS One Research Article Nanopores have become an important tool for molecule detection at single molecular level. With the development of fabrication technology, synthesized solid-state membranes are promising candidate substrates in respect of their exceptional robustness and controllable size and shape. Here, a 30–60 (tip-base) nm conical nanopore fabricated in 100 nm thick silicon nitride (Si(3)N(4)) membrane by focused ion beam (FIB) has been employed for the analysis of λ-DNA translocations at different voltage biases from 200 to 450 mV. The distributions of translocation time and current blockage, as well as the events frequencies as a function of voltage are investigated. Similar to previously published work, the presence and configurations of λ-DNA molecules are characterized, also, we find that greater applied voltages markedly increase the events rate, and stretch the coiled λ-DNA molecules into linear form. However, compared to 6–30 nm ultrathin solid-state nanopores, a threshold voltage of 181 mV is found to be necessary to drive DNA molecules through the nanopore due to conical shape and length of the pore. The speed is slowed down ∼5 times, while the capture radius is ∼2 fold larger. The results show that the large nanopore in thick membrane with an improved stability and throughput also has the ability to detect the molecules at a single molecular level, as well as slows down the velocity of molecules passing through the pore. This work will provide more motivations for the development of nanopores as a Multi-functional sensor for a wide range of biopolymers and nano materials. Public Library of Science 2012-09-24 /pmc/articles/PMC3454345/ /pubmed/23029365 http://dx.doi.org/10.1371/journal.pone.0046014 Text en © 2012 Liu et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Liu, Quanjun
Wu, Hongwen
Wu, Lingzhi
Xie, Xiao
Kong, Jinglin
Ye, Xiaofeng
Liu, Liping
Voltage-Driven Translocation of DNA through a High Throughput Conical Solid-State Nanopore
title Voltage-Driven Translocation of DNA through a High Throughput Conical Solid-State Nanopore
title_full Voltage-Driven Translocation of DNA through a High Throughput Conical Solid-State Nanopore
title_fullStr Voltage-Driven Translocation of DNA through a High Throughput Conical Solid-State Nanopore
title_full_unstemmed Voltage-Driven Translocation of DNA through a High Throughput Conical Solid-State Nanopore
title_short Voltage-Driven Translocation of DNA through a High Throughput Conical Solid-State Nanopore
title_sort voltage-driven translocation of dna through a high throughput conical solid-state nanopore
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3454345/
https://www.ncbi.nlm.nih.gov/pubmed/23029365
http://dx.doi.org/10.1371/journal.pone.0046014
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