Cargando…
The Social Brain: Transcriptome Assembly and Characterization of the Hippocampus from a Social Subterranean Rodent, the Colonial Tuco-Tuco (Ctenomys sociabilis)
Elucidating the genetic mechanisms that underlie complex adaptive phenotypes is a central problem in evolutionary biology. For behavioral biologists, the ability to link variation in gene expression to the occurrence of specific behavioral traits has long been a largely unobtainable goal. Social int...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2012
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3458066/ https://www.ncbi.nlm.nih.gov/pubmed/23049809 http://dx.doi.org/10.1371/journal.pone.0045524 |
_version_ | 1782244619927420928 |
---|---|
author | MacManes, Matthew D. Lacey, Eileen A. |
author_facet | MacManes, Matthew D. Lacey, Eileen A. |
author_sort | MacManes, Matthew D. |
collection | PubMed |
description | Elucidating the genetic mechanisms that underlie complex adaptive phenotypes is a central problem in evolutionary biology. For behavioral biologists, the ability to link variation in gene expression to the occurrence of specific behavioral traits has long been a largely unobtainable goal. Social interactions with conspecifics represent a fundamental component of the behavior of most animal species. Although several studies of mammals have attempted to uncover the genetic bases for social relationships using a candidate gene approach, none have attempted more comprehensive, transcriptome-based analyses using high throughout sequencing. As a first step toward improved understanding of the genetic underpinnings of mammalian sociality, we generated a reference transcriptome for the colonial tuco-tuco (Ctenomys sociabilis), a social species of subterranean rodent that is endemic to southwestern Argentina. Specifically, we analyzed over 500 million Illumina sequencing reads derived from the hippocampi of 10 colonial tuco-tucos housed in captivity under a variety of social conditions. The resulting reference transcriptome provides a critical tool for future studies aimed at exploring relationships between social environment and gene expression in this non-model species of social mammal. |
format | Online Article Text |
id | pubmed-3458066 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-34580662012-10-03 The Social Brain: Transcriptome Assembly and Characterization of the Hippocampus from a Social Subterranean Rodent, the Colonial Tuco-Tuco (Ctenomys sociabilis) MacManes, Matthew D. Lacey, Eileen A. PLoS One Research Article Elucidating the genetic mechanisms that underlie complex adaptive phenotypes is a central problem in evolutionary biology. For behavioral biologists, the ability to link variation in gene expression to the occurrence of specific behavioral traits has long been a largely unobtainable goal. Social interactions with conspecifics represent a fundamental component of the behavior of most animal species. Although several studies of mammals have attempted to uncover the genetic bases for social relationships using a candidate gene approach, none have attempted more comprehensive, transcriptome-based analyses using high throughout sequencing. As a first step toward improved understanding of the genetic underpinnings of mammalian sociality, we generated a reference transcriptome for the colonial tuco-tuco (Ctenomys sociabilis), a social species of subterranean rodent that is endemic to southwestern Argentina. Specifically, we analyzed over 500 million Illumina sequencing reads derived from the hippocampi of 10 colonial tuco-tucos housed in captivity under a variety of social conditions. The resulting reference transcriptome provides a critical tool for future studies aimed at exploring relationships between social environment and gene expression in this non-model species of social mammal. Public Library of Science 2012-09-25 /pmc/articles/PMC3458066/ /pubmed/23049809 http://dx.doi.org/10.1371/journal.pone.0045524 Text en © 2012 MacManes, Lacey http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article MacManes, Matthew D. Lacey, Eileen A. The Social Brain: Transcriptome Assembly and Characterization of the Hippocampus from a Social Subterranean Rodent, the Colonial Tuco-Tuco (Ctenomys sociabilis) |
title | The Social Brain: Transcriptome Assembly and Characterization of the Hippocampus from a Social Subterranean Rodent, the Colonial Tuco-Tuco (Ctenomys sociabilis) |
title_full | The Social Brain: Transcriptome Assembly and Characterization of the Hippocampus from a Social Subterranean Rodent, the Colonial Tuco-Tuco (Ctenomys sociabilis) |
title_fullStr | The Social Brain: Transcriptome Assembly and Characterization of the Hippocampus from a Social Subterranean Rodent, the Colonial Tuco-Tuco (Ctenomys sociabilis) |
title_full_unstemmed | The Social Brain: Transcriptome Assembly and Characterization of the Hippocampus from a Social Subterranean Rodent, the Colonial Tuco-Tuco (Ctenomys sociabilis) |
title_short | The Social Brain: Transcriptome Assembly and Characterization of the Hippocampus from a Social Subterranean Rodent, the Colonial Tuco-Tuco (Ctenomys sociabilis) |
title_sort | social brain: transcriptome assembly and characterization of the hippocampus from a social subterranean rodent, the colonial tuco-tuco (ctenomys sociabilis) |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3458066/ https://www.ncbi.nlm.nih.gov/pubmed/23049809 http://dx.doi.org/10.1371/journal.pone.0045524 |
work_keys_str_mv | AT macmanesmatthewd thesocialbraintranscriptomeassemblyandcharacterizationofthehippocampusfromasocialsubterraneanrodentthecolonialtucotucoctenomyssociabilis AT laceyeileena thesocialbraintranscriptomeassemblyandcharacterizationofthehippocampusfromasocialsubterraneanrodentthecolonialtucotucoctenomyssociabilis AT macmanesmatthewd socialbraintranscriptomeassemblyandcharacterizationofthehippocampusfromasocialsubterraneanrodentthecolonialtucotucoctenomyssociabilis AT laceyeileena socialbraintranscriptomeassemblyandcharacterizationofthehippocampusfromasocialsubterraneanrodentthecolonialtucotucoctenomyssociabilis |