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Colletotrichum – current status and future directions
A review is provided of the current state of understanding of Colletotrichum systematics, focusing on species-level data and the major clades. The taxonomic placement of the genus is discussed, and the evolution of our approach to species concepts and anamorph-teleomorph relationships is described....
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
CBS Fungal Biodiversity Centre
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3458418/ https://www.ncbi.nlm.nih.gov/pubmed/23136460 http://dx.doi.org/10.3114/sim0014 |
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author | Cannon, P.F. Damm, U. Johnston, P.R. Weir, B.S. |
author_facet | Cannon, P.F. Damm, U. Johnston, P.R. Weir, B.S. |
author_sort | Cannon, P.F. |
collection | PubMed |
description | A review is provided of the current state of understanding of Colletotrichum systematics, focusing on species-level data and the major clades. The taxonomic placement of the genus is discussed, and the evolution of our approach to species concepts and anamorph-teleomorph relationships is described. The application of multilocus technologies to phylogenetic analysis of Colletotrichum is reviewed, and selection of potential genes/loci for barcoding purposes is discussed. Host specificity and its relation to speciation and taxonomy is briefly addressed. A short review is presented of the current status of classification of the species clusters that are currently without comprehensive multilocus analyses, emphasising the orbiculare and destructivum aggregates. The future for Colletotrichum biology will be reliant on consensus classification and robust identification tools. In support of these goals, a Subcommission on Colletotrichum has been formed under the auspices of the International Commission on Taxonomy of Fungi, which will administer a carefully curated barcode database for sequence-based identification of species within the BioloMICS web environment. |
format | Online Article Text |
id | pubmed-3458418 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | CBS Fungal Biodiversity Centre |
record_format | MEDLINE/PubMed |
spelling | pubmed-34584182012-11-07 Colletotrichum – current status and future directions Cannon, P.F. Damm, U. Johnston, P.R. Weir, B.S. Stud Mycol Articles A review is provided of the current state of understanding of Colletotrichum systematics, focusing on species-level data and the major clades. The taxonomic placement of the genus is discussed, and the evolution of our approach to species concepts and anamorph-teleomorph relationships is described. The application of multilocus technologies to phylogenetic analysis of Colletotrichum is reviewed, and selection of potential genes/loci for barcoding purposes is discussed. Host specificity and its relation to speciation and taxonomy is briefly addressed. A short review is presented of the current status of classification of the species clusters that are currently without comprehensive multilocus analyses, emphasising the orbiculare and destructivum aggregates. The future for Colletotrichum biology will be reliant on consensus classification and robust identification tools. In support of these goals, a Subcommission on Colletotrichum has been formed under the auspices of the International Commission on Taxonomy of Fungi, which will administer a carefully curated barcode database for sequence-based identification of species within the BioloMICS web environment. CBS Fungal Biodiversity Centre 2012-09-15 /pmc/articles/PMC3458418/ /pubmed/23136460 http://dx.doi.org/10.3114/sim0014 Text en Copyright 2012 CBS-KNAW Fungal Biodiversity Centre You are free to share - to copy, distribute and transmit the work, under the following conditions: Attribution: You must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work). Non-commercial: You may not use this work for commercial purposes. No derivative works: You may not alter, transform, or build upon this work. For any reuse or distribution, you must make clear to others the license terms of this work, which can be found at http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode. Any of the above conditions can be waived if you get permission from the copyright holder. Nothing in this license impairs or restricts the author’s moral rights. |
spellingShingle | Articles Cannon, P.F. Damm, U. Johnston, P.R. Weir, B.S. Colletotrichum – current status and future directions |
title | Colletotrichum – current status and future directions |
title_full | Colletotrichum – current status and future directions |
title_fullStr | Colletotrichum – current status and future directions |
title_full_unstemmed | Colletotrichum – current status and future directions |
title_short | Colletotrichum – current status and future directions |
title_sort | colletotrichum – current status and future directions |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3458418/ https://www.ncbi.nlm.nih.gov/pubmed/23136460 http://dx.doi.org/10.3114/sim0014 |
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