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Tunability of the ratio of cell states after the synthetic diversification by the diversity generator

The autonomous generation of phenotypic diversity in embryonic cell populations can be explained by Waddington’s landscape. The landscape proposes that intra- and inter-cellular interactions mediate the generation of cellular diversity. Recently, we implemented, in a population of Escherichia coli,...

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Detalles Bibliográficos
Autores principales: Sekine, Ryoji, Yamamura, Masayuki, Hagiya, Masami, Kiga, Daisuke
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Landes Bioscience 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3460848/
https://www.ncbi.nlm.nih.gov/pubmed/23060967
http://dx.doi.org/10.4161/cib.20310
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author Sekine, Ryoji
Yamamura, Masayuki
Hagiya, Masami
Kiga, Daisuke
author_facet Sekine, Ryoji
Yamamura, Masayuki
Hagiya, Masami
Kiga, Daisuke
author_sort Sekine, Ryoji
collection PubMed
description The autonomous generation of phenotypic diversity in embryonic cell populations can be explained by Waddington’s landscape. The landscape proposes that intra- and inter-cellular interactions mediate the generation of cellular diversity. Recently, we implemented, in a population of Escherichia coli, a synthetic diversification, which is governed by inter-cellular signaling mediated by acyl-homoserine lactone (AHL). The cells with the diversity generator diversified into two distinct cell states, “high” and “low,” if all of the cells started from the low state. The ratio of the states after the diversification was affected by the velocity of autonomous signal accumulation, which depends on the cell density and the AHL production rate of individual cells. The dependency of the ratio on the initial cell density is reminiscent of the community effect, which is observed in animal development and is important for ES-cell differentiation. Therefore, it is worthwhile reviewing the roles of natural animal gene networks with similar topologies to the diversity generator design. The diversity generator design will also be the basis for a tool to direct cell fates on the population level in tissue engineering. Here, we discuss the tunability of the ratio of cell states by our synthetic circuit design.
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spelling pubmed-34608482012-10-11 Tunability of the ratio of cell states after the synthetic diversification by the diversity generator Sekine, Ryoji Yamamura, Masayuki Hagiya, Masami Kiga, Daisuke Commun Integr Biol Article Addendum The autonomous generation of phenotypic diversity in embryonic cell populations can be explained by Waddington’s landscape. The landscape proposes that intra- and inter-cellular interactions mediate the generation of cellular diversity. Recently, we implemented, in a population of Escherichia coli, a synthetic diversification, which is governed by inter-cellular signaling mediated by acyl-homoserine lactone (AHL). The cells with the diversity generator diversified into two distinct cell states, “high” and “low,” if all of the cells started from the low state. The ratio of the states after the diversification was affected by the velocity of autonomous signal accumulation, which depends on the cell density and the AHL production rate of individual cells. The dependency of the ratio on the initial cell density is reminiscent of the community effect, which is observed in animal development and is important for ES-cell differentiation. Therefore, it is worthwhile reviewing the roles of natural animal gene networks with similar topologies to the diversity generator design. The diversity generator design will also be the basis for a tool to direct cell fates on the population level in tissue engineering. Here, we discuss the tunability of the ratio of cell states by our synthetic circuit design. Landes Bioscience 2012-07-01 /pmc/articles/PMC3460848/ /pubmed/23060967 http://dx.doi.org/10.4161/cib.20310 Text en Copyright © 2012 Landes Bioscience http://creativecommons.org/licenses/by-nc/3.0/ This is an open-access article licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported License. The article may be redistributed, reproduced, and reused for non-commercial purposes, provided the original source is properly cited.
spellingShingle Article Addendum
Sekine, Ryoji
Yamamura, Masayuki
Hagiya, Masami
Kiga, Daisuke
Tunability of the ratio of cell states after the synthetic diversification by the diversity generator
title Tunability of the ratio of cell states after the synthetic diversification by the diversity generator
title_full Tunability of the ratio of cell states after the synthetic diversification by the diversity generator
title_fullStr Tunability of the ratio of cell states after the synthetic diversification by the diversity generator
title_full_unstemmed Tunability of the ratio of cell states after the synthetic diversification by the diversity generator
title_short Tunability of the ratio of cell states after the synthetic diversification by the diversity generator
title_sort tunability of the ratio of cell states after the synthetic diversification by the diversity generator
topic Article Addendum
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3460848/
https://www.ncbi.nlm.nih.gov/pubmed/23060967
http://dx.doi.org/10.4161/cib.20310
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