Cargando…

Genomic Analysis of a Key Innovation in an Experimental E. coli Population

Evolutionary novelties have been important in the history of life, but their origins are usually difficult to examine in detail. We previously described the evolution of a novel trait, aerobic citrate utilization (Cit(+)), in an experimental population of Escherichia coli. Here we analyze genome seq...

Descripción completa

Detalles Bibliográficos
Autores principales:	Blount, Zachary D., Barrick, Jeffrey E., Davidson, Carla J., Lenski, Richard E.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	2012
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3461117/ https://www.ncbi.nlm.nih.gov/pubmed/22992527 http://dx.doi.org/10.1038/nature11514

Ejemplares similares

Evolution of a cross-feeding interaction following a key innovation in a long-term evolution experiment with Escherichia coli
por: Turner, Caroline B., et al.
Publicado: (2023)

Replaying Evolution to Test the Cause of Extinction of One Ecotype in an Experimentally Evolved Population
por: Turner, Caroline B., et al.
Publicado: (2015)

Genomic and phenotypic evolution of Escherichia coli in a novel citrate-only resource environment
por: Blount, Zachary D, et al.
Publicado: (2020)

Experimental evolution with E. coli in diverse resource environments. I. Fluctuating environments promote divergence of replicate populations
por: Cooper, Tim F, et al.
Publicado: (2010)

Escherichia coli rpoB Mutants Have Increased Evolvability in Proportion to Their Fitness Defects
por: Barrick, Jeffrey E., et al.
Publicado: (2010)

Innovation in an E. coli evolution experiment is contingent on maintaining adaptive potential until competition subsides
por: Leon, Dacia, et al.
Publicado: (2018)

The unexhausted potential of E. coli
por: Blount, Zachary D
Publicado: (2015)

Fine-tuning citrate synthase flux potentiates and refines metabolic innovation in the Lenski evolution experiment
por: Quandt, Erik M, et al.
Publicado: (2015)

Synonymous Genetic Variation in Natural Isolates of Escherichia coli Does Not Predict Where Synonymous Substitutions Occur in a Long-Term Experiment
por: Maddamsetti, Rohan, et al.
Publicado: (2015)

Balancing Robustness and Evolvability
por: Lenski, Richard E, et al.
Publicado: (2006)

Mutation Rate Inferred From Synonymous Substitutions in a Long-Term Evolution Experiment With Escherichia coli
por: Wielgoss, Sébastien, et al.
Publicado: (2011)

Long-term experimental evolution in Escherichia coli. XI. Rejection of non-transitive interactions as cause of declining rate of adaptation
por: de Visser, J Arjan GM, et al.
Publicado: (2002)

Large Chromosomal Rearrangements during a Long-Term Evolution Experiment with Escherichia coli
por: Raeside, Colin, et al.
Publicado: (2014)

What is adaptation by natural selection? Perspectives of an experimental microbiologist
por: Lenski, Richard E.
Publicado: (2017)

A Comparison of Methods to Measure Fitness in Escherichia coli
por: Wiser, Michael J., et al.
Publicado: (2015)

The Dynamics of Molecular Evolution Over 60,000 Generations
por: Good, Benjamin H., et al.
Publicado: (2017)

Insertion-sequence-mediated mutations both promote and constrain evolvability during a long-term experiment with bacteria
por: Consuegra, Jessika, et al.
Publicado: (2021)

Long-term experimental evolution decouples size and production costs in Escherichia coli
por: Marshall, Dustin J., et al.
Publicado: (2022)

Tempo and mode of genome evolution in a 50,000-generation experiment
por: Tenaillon, Olivier, et al.
Publicado: (2016)

E Unibus Plurum: Genomic Analysis of an Experimentally Evolved Polymorphism in Escherichia coli
por: Kinnersley, Margie A., et al.
Publicado: (2009)

Rates of gene conversions between Escherichia coli ribosomal operons
por: Gifford, Isaac, et al.
Publicado: (2020)

Predicting Growth Conditions from Internal Metabolic Fluxes in an In-Silico Model of E. coli
por: Sridhara, Viswanadham, et al.
Publicado: (2014)

Large-scale analysis of post-translational modifications in E. coli under glucose-limiting conditions
por: Brown, Colin W., et al.
Publicado: (2017)

Identification and dynamics of a beneficial mutation in a long-term evolution experiment with Escherichia coli
por: Stanek, Mark T, et al.
Publicado: (2009)

Genomic comparisons among Escherichia coli strains B, K-12, and O157:H7 using IS elements as molecular markers
por: Schneider, Dominique, et al.
Publicado: (2002)

Changes in Intrinsic Antibiotic Susceptibility during a Long-Term Evolution Experiment with Escherichia coli
por: Lamrabet, Otmane, et al.
Publicado: (2019)

Increased susceptibility to repeated freeze-thaw cycles in Escherichia coli following long-term evolution in a benign environment
por: Sleight, Sean C, et al.
Publicado: (2006)

A road map for in vivo evolution experiments with blood‐borne parasitic microbes
por: Rodríguez‐Pastor, Ruth, et al.
Publicado: (2022)

Analysis of bacterial genomes from an evolution experiment with horizontal gene transfer shows that recombination can sometimes overwhelm selection
por: Maddamsetti, Rohan, et al.
Publicado: (2018)

Idiosyncratic Fitness Costs of Ampicillin-Resistant Mutants Derived from a Long-Term Experiment with Escherichia coli
por: Jordan, Jalin A., et al.
Publicado: (2022)

The rapid evolution of flagellar ion selectivity in experimental populations of E. coli
por: Ridone, Pietro, et al.
Publicado: (2022)

Expression Profiles Reveal Parallel Evolution of Epistatic Interactions Involving the CRP Regulon in Escherichia coli
por: Cooper, Tim F, et al.
Publicado: (2008)

The genome sequence of E. coli W (ATCC 9637): comparative genome analysis and an improved genome-scale reconstruction of E. coli
por: Archer, Colin T, et al.
Publicado: (2011)

Sustained coevolution of phage Lambda and Escherichia coli involves inner- as well as outer-membrane defences and counter-defences
por: Burmeister, Alita R., et al.
Publicado: (2021)

Directed evolution of Escherichia coli with lower-than-natural plasmid mutation rates
por: Deatherage, Daniel E, et al.
Publicado: (2018)

The Molecular and Genetic Basis of Repeatable Coevolution between Escherichia coli and Bacteriophage T3 in a Laboratory Microcosm
por: Perry, Elizabeth B., et al.
Publicado: (2015)

Evolution of organismal stoichiometry in a long-term experiment with Escherichia coli
por: Turner, Caroline B., et al.
Publicado: (2017)

Mutations in a Conserved Domain of E. coli MscS to the Most Conserved Superfamily Residue Leads to Kinetic Changes
por: Malcolm, Hannah R., et al.
Publicado: (2015)

Sustained fitness gains and variability in fitness trajectories in the long-term evolution experiment with Escherichia coli
por: Lenski, Richard E., et al.
Publicado: (2015)

The E. coli molecular phenotype under different growth conditions
por: Caglar, Mehmet U., et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_4h7j530732hfd4q1cis0rfdt1e