YAHA: fast and flexible long-read alignment with optimal breakpoint detection

Motivation: With improved short-read assembly algorithms and the recent development of long-read sequencers, split mapping will soon be the preferred method for structural variant (SV) detection. Yet, current alignment tools are not well suited for this. Results: We present YAHA, a fast and flexible...

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Detalles Bibliográficos
Autores principales: Faust, Gregory G., Hall, Ira M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2012
Materias:
Original Papers
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3463118/
https://www.ncbi.nlm.nih.gov/pubmed/22829624
http://dx.doi.org/10.1093/bioinformatics/bts456

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3463118/
https://www.ncbi.nlm.nih.gov/pubmed/22829624
http://dx.doi.org/10.1093/bioinformatics/bts456

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