Cargando…
Overlapping ETS and CRE Motifs ((G)/(C)CGGAAGTGACGTCA) Preferentially Bound by GABPα and CREB Proteins
Previously, we identified 8-bps long DNA sequences (8-mers) that localize in human proximal promoters and grouped them into known transcription factor binding sites (TFBS). We now examine split 8-mers consisting of two 4-mers separated by 1-bp to 30-bps (X(4)-N(1-30)-X(4)) to identify pairs of TFBS...
Autores principales: | Chatterjee, Raghunath, Zhao, Jianfei, He, Ximiao, Shlyakhtenko, Andrey, Mann, Ishminder, Waterfall, Joshua J., Meltzer, Paul, Sathyanarayana, B. K., FitzGerald, Peter C., Vinson, Charles |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Genetics Society of America
2012
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3464117/ https://www.ncbi.nlm.nih.gov/pubmed/23050235 http://dx.doi.org/10.1534/g3.112.004002 |
Ejemplares similares
-
GABPα Binding to Overlapping ETS and CRE DNA Motifs Is Enhanced by CREB1: Custom DNA Microarrays
por: He, Ximiao, et al.
Publicado: (2015) -
GABPα and CREB1 Binding to Double Nucleotide
Polymorphisms of Their Consensus Motifs and Cooperative Binding to
the Composite ETS ⇔ CRE Motif (ACCGGAAGTGACGTCA)
por: Assad, Nima, et al.
Publicado: (2019) -
CG methylated microarrays identify a novel methylated sequence bound by the CEBPB|ATF4 heterodimer that is active in vivo
por: Mann, Ishminder K., et al.
Publicado: (2013) -
All and only CpG containing sequences are enriched in promoters abundantly bound by RNA polymerase II in multiple tissues
por: Rozenberg, Julian M, et al.
Publicado: (2008) -
Nucleosomes are enriched at the boundaries of hypomethylated regions (HMRs) in mouse dermal fibroblasts and keratinocytes
por: He, Ximiao, et al.
Publicado: (2014)