Cargando…

Development of a computational strategy to compare repetitive element enrichment between experimental conditions from high-throughput sequencing datasets

Detalles Bibliográficos
Autores principales:	Criscione, Steven, Neretti, Nicola
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2012
Materias:	Oral Presentation
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3467715/ http://dx.doi.org/10.1186/1753-6561-6-S6-O29

Ejemplares similares

Transcriptional landscape of repetitive elements in normal and cancer human cells
por: Criscione, Steven W, et al.
Publicado: (2014)

Estimating enrichment of repetitive elements from high-throughput sequence data
por: Day, Daniel S, et al.
Publicado: (2010)

Understanding the impact of different bioprocess conditions on monoclonal antibody glycosylation in CHO cell cultures through experimental and computational analyses
por: Sou, Si N, et al.
Publicado: (2015)

High-throughput sequencing of the DBA/2J mouse genome
por: Wang, Xusheng, et al.
Publicado: (2010)

Transposable elements become active and mobile in the genomes of aging mammalian somatic tissues
por: De Cecco, Marco, et al.
Publicado: (2013)

Integrating experimental and computational approaches for the proteogenomic characterizations of microbial communities
por: Hettich, Robert L, et al.
Publicado: (2010)

Dataset overlap density analysis
por: Göller, Andreas H
Publicado: (2013)

Blocking protein-protein interactions: the identification of repetitive turn structures as basis for inhibitor building blocks
por: Koch, Oliver
Publicado: (2012)

The effect of repetitive transcranial magnetic stimulation on dorsolateral prefrontal glutamate in youth with treatment-resistant depression
por: Pradhan, S, et al.
Publicado: (2015)

MutaScope: a high-sensitivity variant caller dedicated to high-throughput PCR amplicons sequencing
por: Yost, Shawn, et al.
Publicado: (2012)

Integrating text mining into high-throughput assay analysis
por: Cohen, K Bretonnel
Publicado: (2010)

Tissue microarrays for high-throughput profiling in molecular oncology
por: Kallioniemi, O-P, et al.
Publicado: (2000)

Promoter trap strategy for gene expression analysis under stress conditions of M. tuberculosis latency
por: Yadav, Anant, et al.
Publicado: (2014)

Adaptive enrichment in biomarker-stratified clinical trial design
por: Parashar, Deepak, et al.
Publicado: (2013)

High-throughput targeted SNP discovery using Next Generation Sequencing (NGS) in few selected candidate genes in Eucalyptus camaldulensis
por: Hendre, Prasad Suresh, et al.
Publicado: (2011)

P431 Tip to correct the variation position error in applying long-read high-throughput sequencing technology for fungal identification
por: Langsiri, Nattapong, et al.
Publicado: (2022)

Modeling to inform strategies for malaria eradication
por: Kern, Steven E
Publicado: (2014)

The dynamic separation of pallidal neurons into anti-phase oscillatory groups under Parkinsonian conditions in a computational model
por: Merrison-Hort, Robert, et al.
Publicado: (2014)

Data sharing in clinical trials - practical guidance on anonymising trial datasets
por: Tuck, Christopher, et al.
Publicado: (2015)

Enriching the evidence base: moving towards full societal costs and benefits
por: Brouwer, Werner
Publicado: (2014)

Correlations between DNA methylation levels and nucleosome enrichment in the human genome
por: Collings, Clayton K, et al.
Publicado: (2013)

Selection of circulating PD-1+ lymphocytes from cancer patients enriches for tumor-reactive and mutation-specific lymphocytes
por: Gros, Alena, et al.
Publicado: (2015)

Dissection of molecular pathways of cancer by high-throughput biochip technologies and RNA interference
por: Kallioniemi, O
Publicado: (2005)

Coarse-grained molecular models for high-throughput and multi-scale functional investigations
por: Hamacher, Kay
Publicado: (2008)

P397 Influence of underlying conditions on disease presentation and diagnostic strategy during pulmonary mucormycosis: Anational study of 114 cases
por: Coste, Anne, et al.
Publicado: (2022)

Reprogramming the chromain landscape at eukaryotic regulatory elements
por: Hager, Gordon L
Publicado: (2013)

A hybrid functional/anatomical imaging system for high-throughput planar projection mouse imaging
por: Boone, JM, et al.
Publicado: (2003)

Characterization of a RNA control element that binds p-TEFb and modulates transcription of the human CD3y gene
por: Badran, Bassam, et al.
Publicado: (2006)

Winnow based identification of potent hERG inhibitors in silico: comparative assessment on different datasets
por: Marchese Robinson, Richard L, et al.
Publicado: (2012)

A finite element foot model for simulating muscle imbalances
por: Ledoux, William R, et al.
Publicado: (2008)

Gray-zone late gadolinium enhancement greatly enriches the prediction of ventricular arrhythmia; a cardiovascular MRI study
por: Fakhri, Asghar, et al.
Publicado: (2012)

Cost savings associated with an MRI based strategy in suspected severe mitral regurgitation
por: Uretsky, Seth, et al.
Publicado: (2016)

Therapeutic Strategies
por: Prabhakar, P
Publicado: (2013)

Development of a CCR5-tropic HIV-1 fusion inhibition assay amenable to high-throughput screening for topical microbicides
por: Beer, B, et al.
Publicado: (2006)

A high-throughput genome-wide siRNA screen for ciliogenesis identifies new ciliary functional components and ciliopathy genes
por: Szymanska, K, et al.
Publicado: (2015)

DNA vaccines expressing conserved elements provide potent and broad immune responses
por: Pavlakis, GN, et al.
Publicado: (2012)

VelociGene: a high-throughput approach for functionizing the genome via custom gene mutation and high-resolution expression analysis in mice
por: Yancopoulos, GD
Publicado: (2003)

Toxic chemical element barium content in different biosubstrates of children with congenital heart diseases
por: Koval, O, et al.
Publicado: (2013)

Experimental mouse model of tuberculous uveitis
por: Abhishek, Sudhanshu, et al.
Publicado: (2014)

Multiple detection of pathogens in ticks: development of a high throughput real time PCR chip used as a new epidemiologic investigative tool
por: Michelet, L, et al.
Publicado: (2014)

Cannot write session to /tmp/vufind_sessions/sess_50b2an84gd5q3oba8374pl5jd1