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Glomerular disease search filters for Pubmed, Ovid Medline, and Embase: a development and validation study

BACKGROUND: Tools to enhance physician searches of Medline and other bibliographic databases have potential to improve the application of new knowledge in patient care. This is particularly true for articles about glomerular disease, which are published across multiple disciplines and are often diff...

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Autores principales: Hildebrand, Ainslie M, Iansavichus, Arthur V, Lee, Christopher WC, Haynes, R Brian, Wilczynski, Nancy L, McKibbon, K Ann, Hladunewich, Michelle A, Clark, William F, Cattran, Daniel C, Garg, Amit X
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3471011/
https://www.ncbi.nlm.nih.gov/pubmed/22672435
http://dx.doi.org/10.1186/1472-6947-12-49
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author Hildebrand, Ainslie M
Iansavichus, Arthur V
Lee, Christopher WC
Haynes, R Brian
Wilczynski, Nancy L
McKibbon, K Ann
Hladunewich, Michelle A
Clark, William F
Cattran, Daniel C
Garg, Amit X
author_facet Hildebrand, Ainslie M
Iansavichus, Arthur V
Lee, Christopher WC
Haynes, R Brian
Wilczynski, Nancy L
McKibbon, K Ann
Hladunewich, Michelle A
Clark, William F
Cattran, Daniel C
Garg, Amit X
author_sort Hildebrand, Ainslie M
collection PubMed
description BACKGROUND: Tools to enhance physician searches of Medline and other bibliographic databases have potential to improve the application of new knowledge in patient care. This is particularly true for articles about glomerular disease, which are published across multiple disciplines and are often difficult to track down. Our objective was to develop and test search filters for PubMed, Ovid Medline, and Embase that allow physicians to search within a subset of the database to retrieve articles relevant to glomerular disease. METHODS: We used a diagnostic test assessment framework with development and validation phases. We read a total of 22,992 full text articles for relevance and assigned them to the development or validation set to define the reference standard. We then used combinations of search terms to develop 997,298 unique glomerular disease filters. Outcome measures for each filter included sensitivity, specificity, precision, and accuracy. We selected optimal sensitive and specific search filters for each database and applied them to the validation set to test performance. RESULTS: High performance filters achieved at least 93.8% sensitivity and specificity in the development set. Filters optimized for sensitivity reached at least 96.7% sensitivity and filters optimized for specificity reached at least 98.4% specificity. Performance of these filters was consistent in the validation set and similar among all three databases. CONCLUSIONS: PubMed, Ovid Medline, and Embase can be filtered for articles relevant to glomerular disease in a reliable manner. These filters can now be used to facilitate physician searching.
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spelling pubmed-34710112012-10-16 Glomerular disease search filters for Pubmed, Ovid Medline, and Embase: a development and validation study Hildebrand, Ainslie M Iansavichus, Arthur V Lee, Christopher WC Haynes, R Brian Wilczynski, Nancy L McKibbon, K Ann Hladunewich, Michelle A Clark, William F Cattran, Daniel C Garg, Amit X BMC Med Inform Decis Mak Research Article BACKGROUND: Tools to enhance physician searches of Medline and other bibliographic databases have potential to improve the application of new knowledge in patient care. This is particularly true for articles about glomerular disease, which are published across multiple disciplines and are often difficult to track down. Our objective was to develop and test search filters for PubMed, Ovid Medline, and Embase that allow physicians to search within a subset of the database to retrieve articles relevant to glomerular disease. METHODS: We used a diagnostic test assessment framework with development and validation phases. We read a total of 22,992 full text articles for relevance and assigned them to the development or validation set to define the reference standard. We then used combinations of search terms to develop 997,298 unique glomerular disease filters. Outcome measures for each filter included sensitivity, specificity, precision, and accuracy. We selected optimal sensitive and specific search filters for each database and applied them to the validation set to test performance. RESULTS: High performance filters achieved at least 93.8% sensitivity and specificity in the development set. Filters optimized for sensitivity reached at least 96.7% sensitivity and filters optimized for specificity reached at least 98.4% specificity. Performance of these filters was consistent in the validation set and similar among all three databases. CONCLUSIONS: PubMed, Ovid Medline, and Embase can be filtered for articles relevant to glomerular disease in a reliable manner. These filters can now be used to facilitate physician searching. BioMed Central 2012-06-06 /pmc/articles/PMC3471011/ /pubmed/22672435 http://dx.doi.org/10.1186/1472-6947-12-49 Text en Copyright ©2012 Hildebrand et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Hildebrand, Ainslie M
Iansavichus, Arthur V
Lee, Christopher WC
Haynes, R Brian
Wilczynski, Nancy L
McKibbon, K Ann
Hladunewich, Michelle A
Clark, William F
Cattran, Daniel C
Garg, Amit X
Glomerular disease search filters for Pubmed, Ovid Medline, and Embase: a development and validation study
title Glomerular disease search filters for Pubmed, Ovid Medline, and Embase: a development and validation study
title_full Glomerular disease search filters for Pubmed, Ovid Medline, and Embase: a development and validation study
title_fullStr Glomerular disease search filters for Pubmed, Ovid Medline, and Embase: a development and validation study
title_full_unstemmed Glomerular disease search filters for Pubmed, Ovid Medline, and Embase: a development and validation study
title_short Glomerular disease search filters for Pubmed, Ovid Medline, and Embase: a development and validation study
title_sort glomerular disease search filters for pubmed, ovid medline, and embase: a development and validation study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3471011/
https://www.ncbi.nlm.nih.gov/pubmed/22672435
http://dx.doi.org/10.1186/1472-6947-12-49
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