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Glomerular disease search filters for Pubmed, Ovid Medline, and Embase: a development and validation study
BACKGROUND: Tools to enhance physician searches of Medline and other bibliographic databases have potential to improve the application of new knowledge in patient care. This is particularly true for articles about glomerular disease, which are published across multiple disciplines and are often diff...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3471011/ https://www.ncbi.nlm.nih.gov/pubmed/22672435 http://dx.doi.org/10.1186/1472-6947-12-49 |
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author | Hildebrand, Ainslie M Iansavichus, Arthur V Lee, Christopher WC Haynes, R Brian Wilczynski, Nancy L McKibbon, K Ann Hladunewich, Michelle A Clark, William F Cattran, Daniel C Garg, Amit X |
author_facet | Hildebrand, Ainslie M Iansavichus, Arthur V Lee, Christopher WC Haynes, R Brian Wilczynski, Nancy L McKibbon, K Ann Hladunewich, Michelle A Clark, William F Cattran, Daniel C Garg, Amit X |
author_sort | Hildebrand, Ainslie M |
collection | PubMed |
description | BACKGROUND: Tools to enhance physician searches of Medline and other bibliographic databases have potential to improve the application of new knowledge in patient care. This is particularly true for articles about glomerular disease, which are published across multiple disciplines and are often difficult to track down. Our objective was to develop and test search filters for PubMed, Ovid Medline, and Embase that allow physicians to search within a subset of the database to retrieve articles relevant to glomerular disease. METHODS: We used a diagnostic test assessment framework with development and validation phases. We read a total of 22,992 full text articles for relevance and assigned them to the development or validation set to define the reference standard. We then used combinations of search terms to develop 997,298 unique glomerular disease filters. Outcome measures for each filter included sensitivity, specificity, precision, and accuracy. We selected optimal sensitive and specific search filters for each database and applied them to the validation set to test performance. RESULTS: High performance filters achieved at least 93.8% sensitivity and specificity in the development set. Filters optimized for sensitivity reached at least 96.7% sensitivity and filters optimized for specificity reached at least 98.4% specificity. Performance of these filters was consistent in the validation set and similar among all three databases. CONCLUSIONS: PubMed, Ovid Medline, and Embase can be filtered for articles relevant to glomerular disease in a reliable manner. These filters can now be used to facilitate physician searching. |
format | Online Article Text |
id | pubmed-3471011 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-34710112012-10-16 Glomerular disease search filters for Pubmed, Ovid Medline, and Embase: a development and validation study Hildebrand, Ainslie M Iansavichus, Arthur V Lee, Christopher WC Haynes, R Brian Wilczynski, Nancy L McKibbon, K Ann Hladunewich, Michelle A Clark, William F Cattran, Daniel C Garg, Amit X BMC Med Inform Decis Mak Research Article BACKGROUND: Tools to enhance physician searches of Medline and other bibliographic databases have potential to improve the application of new knowledge in patient care. This is particularly true for articles about glomerular disease, which are published across multiple disciplines and are often difficult to track down. Our objective was to develop and test search filters for PubMed, Ovid Medline, and Embase that allow physicians to search within a subset of the database to retrieve articles relevant to glomerular disease. METHODS: We used a diagnostic test assessment framework with development and validation phases. We read a total of 22,992 full text articles for relevance and assigned them to the development or validation set to define the reference standard. We then used combinations of search terms to develop 997,298 unique glomerular disease filters. Outcome measures for each filter included sensitivity, specificity, precision, and accuracy. We selected optimal sensitive and specific search filters for each database and applied them to the validation set to test performance. RESULTS: High performance filters achieved at least 93.8% sensitivity and specificity in the development set. Filters optimized for sensitivity reached at least 96.7% sensitivity and filters optimized for specificity reached at least 98.4% specificity. Performance of these filters was consistent in the validation set and similar among all three databases. CONCLUSIONS: PubMed, Ovid Medline, and Embase can be filtered for articles relevant to glomerular disease in a reliable manner. These filters can now be used to facilitate physician searching. BioMed Central 2012-06-06 /pmc/articles/PMC3471011/ /pubmed/22672435 http://dx.doi.org/10.1186/1472-6947-12-49 Text en Copyright ©2012 Hildebrand et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Hildebrand, Ainslie M Iansavichus, Arthur V Lee, Christopher WC Haynes, R Brian Wilczynski, Nancy L McKibbon, K Ann Hladunewich, Michelle A Clark, William F Cattran, Daniel C Garg, Amit X Glomerular disease search filters for Pubmed, Ovid Medline, and Embase: a development and validation study |
title | Glomerular disease search filters for Pubmed, Ovid Medline, and Embase: a development and validation study |
title_full | Glomerular disease search filters for Pubmed, Ovid Medline, and Embase: a development and validation study |
title_fullStr | Glomerular disease search filters for Pubmed, Ovid Medline, and Embase: a development and validation study |
title_full_unstemmed | Glomerular disease search filters for Pubmed, Ovid Medline, and Embase: a development and validation study |
title_short | Glomerular disease search filters for Pubmed, Ovid Medline, and Embase: a development and validation study |
title_sort | glomerular disease search filters for pubmed, ovid medline, and embase: a development and validation study |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3471011/ https://www.ncbi.nlm.nih.gov/pubmed/22672435 http://dx.doi.org/10.1186/1472-6947-12-49 |
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