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Protein Linewidth and Solvent Dynamics in Frozen Solution NMR
Solid-state NMR of proteins in frozen aqueous solution is a potentially powerful technique in structural biology, especially if it is combined with dynamic nuclear polarization signal enhancement strategies. One concern regarding NMR studies of frozen solution protein samples at low temperatures is...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3471952/ https://www.ncbi.nlm.nih.gov/pubmed/23077575 http://dx.doi.org/10.1371/journal.pone.0047242 |
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author | Siemer, Ansgar B. Huang, Kuo-Ying McDermott, Ann E. |
author_facet | Siemer, Ansgar B. Huang, Kuo-Ying McDermott, Ann E. |
author_sort | Siemer, Ansgar B. |
collection | PubMed |
description | Solid-state NMR of proteins in frozen aqueous solution is a potentially powerful technique in structural biology, especially if it is combined with dynamic nuclear polarization signal enhancement strategies. One concern regarding NMR studies of frozen solution protein samples at low temperatures is that they may have poor linewidths, thus preventing high-resolution studies. To learn more about how the solvent shell composition and temperature affects the protein linewidth, we recorded (1)H, (2)H, and (13)C spectra of ubiquitin in frozen water and frozen glycerol-water solutions at different temperatures. We found that the (13)C protein linewidths generally increase with decreasing temperature. This line broadening was found to be inhomogeneous and independent of proton decoupling. In pure water, we observe an abrupt line broadening with the freezing of the bulk solvent, followed by continuous line broadening at lower temperatures. In frozen glycerol-water, we did not observe an abrupt line broadening and the NMR lines were generally narrower than for pure water at the same temperature. (1)H and (2)H measurements characterizing the dynamics of water that is in exchange with the protein showed that the (13)C line broadening is relatively independent from the arrest of isotropic water motions. |
format | Online Article Text |
id | pubmed-3471952 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-34719522012-10-17 Protein Linewidth and Solvent Dynamics in Frozen Solution NMR Siemer, Ansgar B. Huang, Kuo-Ying McDermott, Ann E. PLoS One Research Article Solid-state NMR of proteins in frozen aqueous solution is a potentially powerful technique in structural biology, especially if it is combined with dynamic nuclear polarization signal enhancement strategies. One concern regarding NMR studies of frozen solution protein samples at low temperatures is that they may have poor linewidths, thus preventing high-resolution studies. To learn more about how the solvent shell composition and temperature affects the protein linewidth, we recorded (1)H, (2)H, and (13)C spectra of ubiquitin in frozen water and frozen glycerol-water solutions at different temperatures. We found that the (13)C protein linewidths generally increase with decreasing temperature. This line broadening was found to be inhomogeneous and independent of proton decoupling. In pure water, we observe an abrupt line broadening with the freezing of the bulk solvent, followed by continuous line broadening at lower temperatures. In frozen glycerol-water, we did not observe an abrupt line broadening and the NMR lines were generally narrower than for pure water at the same temperature. (1)H and (2)H measurements characterizing the dynamics of water that is in exchange with the protein showed that the (13)C line broadening is relatively independent from the arrest of isotropic water motions. Public Library of Science 2012-10-15 /pmc/articles/PMC3471952/ /pubmed/23077575 http://dx.doi.org/10.1371/journal.pone.0047242 Text en © 2012 Siemer et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Siemer, Ansgar B. Huang, Kuo-Ying McDermott, Ann E. Protein Linewidth and Solvent Dynamics in Frozen Solution NMR |
title | Protein Linewidth and Solvent Dynamics in Frozen Solution NMR |
title_full | Protein Linewidth and Solvent Dynamics in Frozen Solution NMR |
title_fullStr | Protein Linewidth and Solvent Dynamics in Frozen Solution NMR |
title_full_unstemmed | Protein Linewidth and Solvent Dynamics in Frozen Solution NMR |
title_short | Protein Linewidth and Solvent Dynamics in Frozen Solution NMR |
title_sort | protein linewidth and solvent dynamics in frozen solution nmr |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3471952/ https://www.ncbi.nlm.nih.gov/pubmed/23077575 http://dx.doi.org/10.1371/journal.pone.0047242 |
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