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Protein Linewidth and Solvent Dynamics in Frozen Solution NMR

Solid-state NMR of proteins in frozen aqueous solution is a potentially powerful technique in structural biology, especially if it is combined with dynamic nuclear polarization signal enhancement strategies. One concern regarding NMR studies of frozen solution protein samples at low temperatures is...

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Autores principales: Siemer, Ansgar B., Huang, Kuo-Ying, McDermott, Ann E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3471952/
https://www.ncbi.nlm.nih.gov/pubmed/23077575
http://dx.doi.org/10.1371/journal.pone.0047242
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author Siemer, Ansgar B.
Huang, Kuo-Ying
McDermott, Ann E.
author_facet Siemer, Ansgar B.
Huang, Kuo-Ying
McDermott, Ann E.
author_sort Siemer, Ansgar B.
collection PubMed
description Solid-state NMR of proteins in frozen aqueous solution is a potentially powerful technique in structural biology, especially if it is combined with dynamic nuclear polarization signal enhancement strategies. One concern regarding NMR studies of frozen solution protein samples at low temperatures is that they may have poor linewidths, thus preventing high-resolution studies. To learn more about how the solvent shell composition and temperature affects the protein linewidth, we recorded (1)H, (2)H, and (13)C spectra of ubiquitin in frozen water and frozen glycerol-water solutions at different temperatures. We found that the (13)C protein linewidths generally increase with decreasing temperature. This line broadening was found to be inhomogeneous and independent of proton decoupling. In pure water, we observe an abrupt line broadening with the freezing of the bulk solvent, followed by continuous line broadening at lower temperatures. In frozen glycerol-water, we did not observe an abrupt line broadening and the NMR lines were generally narrower than for pure water at the same temperature. (1)H and (2)H measurements characterizing the dynamics of water that is in exchange with the protein showed that the (13)C line broadening is relatively independent from the arrest of isotropic water motions.
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spelling pubmed-34719522012-10-17 Protein Linewidth and Solvent Dynamics in Frozen Solution NMR Siemer, Ansgar B. Huang, Kuo-Ying McDermott, Ann E. PLoS One Research Article Solid-state NMR of proteins in frozen aqueous solution is a potentially powerful technique in structural biology, especially if it is combined with dynamic nuclear polarization signal enhancement strategies. One concern regarding NMR studies of frozen solution protein samples at low temperatures is that they may have poor linewidths, thus preventing high-resolution studies. To learn more about how the solvent shell composition and temperature affects the protein linewidth, we recorded (1)H, (2)H, and (13)C spectra of ubiquitin in frozen water and frozen glycerol-water solutions at different temperatures. We found that the (13)C protein linewidths generally increase with decreasing temperature. This line broadening was found to be inhomogeneous and independent of proton decoupling. In pure water, we observe an abrupt line broadening with the freezing of the bulk solvent, followed by continuous line broadening at lower temperatures. In frozen glycerol-water, we did not observe an abrupt line broadening and the NMR lines were generally narrower than for pure water at the same temperature. (1)H and (2)H measurements characterizing the dynamics of water that is in exchange with the protein showed that the (13)C line broadening is relatively independent from the arrest of isotropic water motions. Public Library of Science 2012-10-15 /pmc/articles/PMC3471952/ /pubmed/23077575 http://dx.doi.org/10.1371/journal.pone.0047242 Text en © 2012 Siemer et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Siemer, Ansgar B.
Huang, Kuo-Ying
McDermott, Ann E.
Protein Linewidth and Solvent Dynamics in Frozen Solution NMR
title Protein Linewidth and Solvent Dynamics in Frozen Solution NMR
title_full Protein Linewidth and Solvent Dynamics in Frozen Solution NMR
title_fullStr Protein Linewidth and Solvent Dynamics in Frozen Solution NMR
title_full_unstemmed Protein Linewidth and Solvent Dynamics in Frozen Solution NMR
title_short Protein Linewidth and Solvent Dynamics in Frozen Solution NMR
title_sort protein linewidth and solvent dynamics in frozen solution nmr
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3471952/
https://www.ncbi.nlm.nih.gov/pubmed/23077575
http://dx.doi.org/10.1371/journal.pone.0047242
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