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Isolation and Characterization of Microsatellite Markers for Passiflora contracta

Passiflora contracta Vitta (Passifloraceae) is an endemic species of the Atlantic Rainforest, one of the most species-rich ecoregions in the world, although extremely endangered. We have developed an enriched microsatellite library in order to fine-scale studies of the genetic structure of P. contra...

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Detalles Bibliográficos
Autores principales: Cazé, Ana Luíza R., Kriedt, Raquel A., Beheregaray, Luciano B., Bonatto, Sandro L., Freitas, Loreta B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Molecular Diversity Preservation International (MDPI) 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3472749/
https://www.ncbi.nlm.nih.gov/pubmed/23109857
http://dx.doi.org/10.3390/ijms130911343
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author Cazé, Ana Luíza R.
Kriedt, Raquel A.
Beheregaray, Luciano B.
Bonatto, Sandro L.
Freitas, Loreta B.
author_facet Cazé, Ana Luíza R.
Kriedt, Raquel A.
Beheregaray, Luciano B.
Bonatto, Sandro L.
Freitas, Loreta B.
author_sort Cazé, Ana Luíza R.
collection PubMed
description Passiflora contracta Vitta (Passifloraceae) is an endemic species of the Atlantic Rainforest, one of the most species-rich ecoregions in the world, although extremely endangered. We have developed an enriched microsatellite library in order to fine-scale studies of the genetic structure of P. contracta. Twelve pairs of microsatellite primers were designed, and seven loci were successfully amplified and characterized by genotyping two wild populations of P. contracta. All seven loci were polymorphic, with an average number of alleles found being 4.8 and 5 per population. The cross-species transferability was tested using sister species Passiflora ovalis Vell. Ex Roemer. The development of these markers will contribute to the studies of population genetics in P. contracta as well as future studies concerning diversity patterns in the Atlantic Rainforest, and may also help to establish strategies for the conservation of this species.
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spelling pubmed-34727492012-10-29 Isolation and Characterization of Microsatellite Markers for Passiflora contracta Cazé, Ana Luíza R. Kriedt, Raquel A. Beheregaray, Luciano B. Bonatto, Sandro L. Freitas, Loreta B. Int J Mol Sci Short Note Passiflora contracta Vitta (Passifloraceae) is an endemic species of the Atlantic Rainforest, one of the most species-rich ecoregions in the world, although extremely endangered. We have developed an enriched microsatellite library in order to fine-scale studies of the genetic structure of P. contracta. Twelve pairs of microsatellite primers were designed, and seven loci were successfully amplified and characterized by genotyping two wild populations of P. contracta. All seven loci were polymorphic, with an average number of alleles found being 4.8 and 5 per population. The cross-species transferability was tested using sister species Passiflora ovalis Vell. Ex Roemer. The development of these markers will contribute to the studies of population genetics in P. contracta as well as future studies concerning diversity patterns in the Atlantic Rainforest, and may also help to establish strategies for the conservation of this species. Molecular Diversity Preservation International (MDPI) 2012-09-12 /pmc/articles/PMC3472749/ /pubmed/23109857 http://dx.doi.org/10.3390/ijms130911343 Text en © 2012 by the authors; licensee Molecular Diversity Preservation International, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0 This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Short Note
Cazé, Ana Luíza R.
Kriedt, Raquel A.
Beheregaray, Luciano B.
Bonatto, Sandro L.
Freitas, Loreta B.
Isolation and Characterization of Microsatellite Markers for Passiflora contracta
title Isolation and Characterization of Microsatellite Markers for Passiflora contracta
title_full Isolation and Characterization of Microsatellite Markers for Passiflora contracta
title_fullStr Isolation and Characterization of Microsatellite Markers for Passiflora contracta
title_full_unstemmed Isolation and Characterization of Microsatellite Markers for Passiflora contracta
title_short Isolation and Characterization of Microsatellite Markers for Passiflora contracta
title_sort isolation and characterization of microsatellite markers for passiflora contracta
topic Short Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3472749/
https://www.ncbi.nlm.nih.gov/pubmed/23109857
http://dx.doi.org/10.3390/ijms130911343
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