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Fast Analysis of Superoxide Dismutase (SOD) Activity in Barley Leaves Using Visible and Near Infrared Spectroscopy
Visible and near infrared (Vis/NIR) spectroscopy was investigated for the fast analysis of superoxide dismutase (SOD) activity in barley (Hordeum vulgare L.) leaves. Seven different spectra preprocessing methods were compared. Four regression methods were used for comparison of prediction performanc...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Molecular Diversity Preservation International (MDPI)
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3472862/ https://www.ncbi.nlm.nih.gov/pubmed/23112634 http://dx.doi.org/10.3390/s120810871 |
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author | Kong, Wenwen Zhao, Yun Liu, Fei He, Yong Tian, Tian Zhou, Weijun |
author_facet | Kong, Wenwen Zhao, Yun Liu, Fei He, Yong Tian, Tian Zhou, Weijun |
author_sort | Kong, Wenwen |
collection | PubMed |
description | Visible and near infrared (Vis/NIR) spectroscopy was investigated for the fast analysis of superoxide dismutase (SOD) activity in barley (Hordeum vulgare L.) leaves. Seven different spectra preprocessing methods were compared. Four regression methods were used for comparison of prediction performance, including partial least squares (PLS), multiple linear regression (MLR), least squares-support vector machine (LS-SVM) and Gaussian process regress (GPR). Successive projections algorithm (SPA) and regression coefficients (RC) were applied to select effective wavelengths (EWs) to develop more parsimonious models. The results indicated that Savitzky-Golay smoothing (SG) and multiplicative scatter correction (MSC) should be selected as the optimum preprocessing methods. The best prediction performance was achieved by the LV-LS-SVM model on SG spectra, and the correlation coefficients (r) and root mean square error of prediction (RMSEP) were 0.9064 and 0.5336, respectively. The conclusion was that Vis/NIR spectroscopy combined with multivariate analysis could be successfully applied for the fast estimation of SOD activity in barley leaves. |
format | Online Article Text |
id | pubmed-3472862 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Molecular Diversity Preservation International (MDPI) |
record_format | MEDLINE/PubMed |
spelling | pubmed-34728622012-10-30 Fast Analysis of Superoxide Dismutase (SOD) Activity in Barley Leaves Using Visible and Near Infrared Spectroscopy Kong, Wenwen Zhao, Yun Liu, Fei He, Yong Tian, Tian Zhou, Weijun Sensors (Basel) Article Visible and near infrared (Vis/NIR) spectroscopy was investigated for the fast analysis of superoxide dismutase (SOD) activity in barley (Hordeum vulgare L.) leaves. Seven different spectra preprocessing methods were compared. Four regression methods were used for comparison of prediction performance, including partial least squares (PLS), multiple linear regression (MLR), least squares-support vector machine (LS-SVM) and Gaussian process regress (GPR). Successive projections algorithm (SPA) and regression coefficients (RC) were applied to select effective wavelengths (EWs) to develop more parsimonious models. The results indicated that Savitzky-Golay smoothing (SG) and multiplicative scatter correction (MSC) should be selected as the optimum preprocessing methods. The best prediction performance was achieved by the LV-LS-SVM model on SG spectra, and the correlation coefficients (r) and root mean square error of prediction (RMSEP) were 0.9064 and 0.5336, respectively. The conclusion was that Vis/NIR spectroscopy combined with multivariate analysis could be successfully applied for the fast estimation of SOD activity in barley leaves. Molecular Diversity Preservation International (MDPI) 2012-08-07 /pmc/articles/PMC3472862/ /pubmed/23112634 http://dx.doi.org/10.3390/s120810871 Text en © 2012 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/). |
spellingShingle | Article Kong, Wenwen Zhao, Yun Liu, Fei He, Yong Tian, Tian Zhou, Weijun Fast Analysis of Superoxide Dismutase (SOD) Activity in Barley Leaves Using Visible and Near Infrared Spectroscopy |
title | Fast Analysis of Superoxide Dismutase (SOD) Activity in Barley Leaves Using Visible and Near Infrared Spectroscopy |
title_full | Fast Analysis of Superoxide Dismutase (SOD) Activity in Barley Leaves Using Visible and Near Infrared Spectroscopy |
title_fullStr | Fast Analysis of Superoxide Dismutase (SOD) Activity in Barley Leaves Using Visible and Near Infrared Spectroscopy |
title_full_unstemmed | Fast Analysis of Superoxide Dismutase (SOD) Activity in Barley Leaves Using Visible and Near Infrared Spectroscopy |
title_short | Fast Analysis of Superoxide Dismutase (SOD) Activity in Barley Leaves Using Visible and Near Infrared Spectroscopy |
title_sort | fast analysis of superoxide dismutase (sod) activity in barley leaves using visible and near infrared spectroscopy |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3472862/ https://www.ncbi.nlm.nih.gov/pubmed/23112634 http://dx.doi.org/10.3390/s120810871 |
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