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Prediction of C. elegans Longevity Genes by Human and Worm Longevity Networks
Intricate and interconnected pathways modulate longevity, but screens to identify the components of these pathways have not been saturating. Because biological processes are often executed by protein complexes and fine-tuned by regulatory factors, the first-order protein-protein interactors of known...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3483217/ https://www.ncbi.nlm.nih.gov/pubmed/23144747 http://dx.doi.org/10.1371/journal.pone.0048282 |
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author | Tacutu, Robi Shore, David E. Budovsky, Arie de Magalhães, João Pedro Ruvkun, Gary Fraifeld, Vadim E. Curran, Sean P. |
author_facet | Tacutu, Robi Shore, David E. Budovsky, Arie de Magalhães, João Pedro Ruvkun, Gary Fraifeld, Vadim E. Curran, Sean P. |
author_sort | Tacutu, Robi |
collection | PubMed |
description | Intricate and interconnected pathways modulate longevity, but screens to identify the components of these pathways have not been saturating. Because biological processes are often executed by protein complexes and fine-tuned by regulatory factors, the first-order protein-protein interactors of known longevity genes are likely to participate in the regulation of longevity. Data-rich maps of protein interactions have been established for many cardinal organisms such as yeast, worms, and humans. We propose that these interaction maps could be mined for the identification of new putative regulators of longevity. For this purpose, we have constructed longevity networks in both humans and worms. We reasoned that the essential first-order interactors of known longevity-associated genes in these networks are more likely to have longevity phenotypes than randomly chosen genes. We have used C. elegans to determine whether post-developmental inactivation of these essential genes modulates lifespan. Our results suggest that the worm and human longevity networks are functionally relevant and possess a high predictive power for identifying new longevity regulators. |
format | Online Article Text |
id | pubmed-3483217 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-34832172012-11-09 Prediction of C. elegans Longevity Genes by Human and Worm Longevity Networks Tacutu, Robi Shore, David E. Budovsky, Arie de Magalhães, João Pedro Ruvkun, Gary Fraifeld, Vadim E. Curran, Sean P. PLoS One Research Article Intricate and interconnected pathways modulate longevity, but screens to identify the components of these pathways have not been saturating. Because biological processes are often executed by protein complexes and fine-tuned by regulatory factors, the first-order protein-protein interactors of known longevity genes are likely to participate in the regulation of longevity. Data-rich maps of protein interactions have been established for many cardinal organisms such as yeast, worms, and humans. We propose that these interaction maps could be mined for the identification of new putative regulators of longevity. For this purpose, we have constructed longevity networks in both humans and worms. We reasoned that the essential first-order interactors of known longevity-associated genes in these networks are more likely to have longevity phenotypes than randomly chosen genes. We have used C. elegans to determine whether post-developmental inactivation of these essential genes modulates lifespan. Our results suggest that the worm and human longevity networks are functionally relevant and possess a high predictive power for identifying new longevity regulators. Public Library of Science 2012-10-29 /pmc/articles/PMC3483217/ /pubmed/23144747 http://dx.doi.org/10.1371/journal.pone.0048282 Text en © 2012 Tacutu et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Tacutu, Robi Shore, David E. Budovsky, Arie de Magalhães, João Pedro Ruvkun, Gary Fraifeld, Vadim E. Curran, Sean P. Prediction of C. elegans Longevity Genes by Human and Worm Longevity Networks |
title | Prediction of C. elegans Longevity Genes by Human and Worm Longevity Networks |
title_full | Prediction of C. elegans Longevity Genes by Human and Worm Longevity Networks |
title_fullStr | Prediction of C. elegans Longevity Genes by Human and Worm Longevity Networks |
title_full_unstemmed | Prediction of C. elegans Longevity Genes by Human and Worm Longevity Networks |
title_short | Prediction of C. elegans Longevity Genes by Human and Worm Longevity Networks |
title_sort | prediction of c. elegans longevity genes by human and worm longevity networks |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3483217/ https://www.ncbi.nlm.nih.gov/pubmed/23144747 http://dx.doi.org/10.1371/journal.pone.0048282 |
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