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Diversity of Culturable Soil Micro-fungi along Altitudinal Gradients of Eastern Himalayas
Very few studies have addressed the phylogenetic diversity of fungi from Northeast India under the Eastern Himalayan range. In the present study, an attempt has been made to study the phylogenetic diversity of culturable soil fungi along the altitudinal gradients of eastern Himalayas. Soil samples f...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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The Korean Society of Mycology
2012
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3483390/ https://www.ncbi.nlm.nih.gov/pubmed/23115506 http://dx.doi.org/10.5941/MYCO.2012.40.3.151 |
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author | Devi, Lamabam Sophiya Khaund, Polashree Nongkhlaw, Fenella M. W. Joshi, S. R. |
author_facet | Devi, Lamabam Sophiya Khaund, Polashree Nongkhlaw, Fenella M. W. Joshi, S. R. |
author_sort | Devi, Lamabam Sophiya |
collection | PubMed |
description | Very few studies have addressed the phylogenetic diversity of fungi from Northeast India under the Eastern Himalayan range. In the present study, an attempt has been made to study the phylogenetic diversity of culturable soil fungi along the altitudinal gradients of eastern Himalayas. Soil samples from 24 m above sea level to 2,000 m above sea level altitudes of North-East India were collected to investigate soil micro-fungal community structure and diversity. Molecular characterization of the isolates was done by PCR amplification of 18S rDNA using universal primers. Phylogenetic analysis using BLAST revealed variation in the distribution and richness of different fungal biodiversity over a wide range of altitudes. A total of 107 isolates were characterized belonging to the phyla Ascomycota and Zygomycota, corresponding to seven orders (Eurotiales, Hypocreales, Calosphaeriales, Capnodiales, Pleosporales, Mucorales, and Mortierellales) and Incertae sedis. The characterized isolates were analysed for richness, evenness and diversity indices. Fungal diversity had significant correlation with soil physico-chemical parameters and the altitude. Eurotiales and Hypocreales were most diverse and abundant group of fungi along the entire altitudinal stretch. Species of Penicillium (D = 1.44) and Aspergillus (D = 1.288) were found to have highest diversity index followed by Talaromyces (D = 1.26) and Fusarium (D = 1.26). Fungal distribution showed negative correlation with altitude and soil moisture content. Soil temperature, pH, humidity and ambient temperature showed positive correlation with fungal distribution. |
format | Online Article Text |
id | pubmed-3483390 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | The Korean Society of Mycology |
record_format | MEDLINE/PubMed |
spelling | pubmed-34833902012-10-31 Diversity of Culturable Soil Micro-fungi along Altitudinal Gradients of Eastern Himalayas Devi, Lamabam Sophiya Khaund, Polashree Nongkhlaw, Fenella M. W. Joshi, S. R. Mycobiology Research Article Very few studies have addressed the phylogenetic diversity of fungi from Northeast India under the Eastern Himalayan range. In the present study, an attempt has been made to study the phylogenetic diversity of culturable soil fungi along the altitudinal gradients of eastern Himalayas. Soil samples from 24 m above sea level to 2,000 m above sea level altitudes of North-East India were collected to investigate soil micro-fungal community structure and diversity. Molecular characterization of the isolates was done by PCR amplification of 18S rDNA using universal primers. Phylogenetic analysis using BLAST revealed variation in the distribution and richness of different fungal biodiversity over a wide range of altitudes. A total of 107 isolates were characterized belonging to the phyla Ascomycota and Zygomycota, corresponding to seven orders (Eurotiales, Hypocreales, Calosphaeriales, Capnodiales, Pleosporales, Mucorales, and Mortierellales) and Incertae sedis. The characterized isolates were analysed for richness, evenness and diversity indices. Fungal diversity had significant correlation with soil physico-chemical parameters and the altitude. Eurotiales and Hypocreales were most diverse and abundant group of fungi along the entire altitudinal stretch. Species of Penicillium (D = 1.44) and Aspergillus (D = 1.288) were found to have highest diversity index followed by Talaromyces (D = 1.26) and Fusarium (D = 1.26). Fungal distribution showed negative correlation with altitude and soil moisture content. Soil temperature, pH, humidity and ambient temperature showed positive correlation with fungal distribution. The Korean Society of Mycology 2012-09 2012-09-30 /pmc/articles/PMC3483390/ /pubmed/23115506 http://dx.doi.org/10.5941/MYCO.2012.40.3.151 Text en © The Korean Society of Mycology http://creativecommons.org/licenses/by-nc/3.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Devi, Lamabam Sophiya Khaund, Polashree Nongkhlaw, Fenella M. W. Joshi, S. R. Diversity of Culturable Soil Micro-fungi along Altitudinal Gradients of Eastern Himalayas |
title | Diversity of Culturable Soil Micro-fungi along Altitudinal Gradients of Eastern Himalayas |
title_full | Diversity of Culturable Soil Micro-fungi along Altitudinal Gradients of Eastern Himalayas |
title_fullStr | Diversity of Culturable Soil Micro-fungi along Altitudinal Gradients of Eastern Himalayas |
title_full_unstemmed | Diversity of Culturable Soil Micro-fungi along Altitudinal Gradients of Eastern Himalayas |
title_short | Diversity of Culturable Soil Micro-fungi along Altitudinal Gradients of Eastern Himalayas |
title_sort | diversity of culturable soil micro-fungi along altitudinal gradients of eastern himalayas |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3483390/ https://www.ncbi.nlm.nih.gov/pubmed/23115506 http://dx.doi.org/10.5941/MYCO.2012.40.3.151 |
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