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Mesoscopic Model of Actin-Based Propulsion

Two theoretical models dominate current understanding of actin-based propulsion: microscopic polymerization ratchet model predicts that growing and writhing actin filaments generate forces and movements, while macroscopic elastic propulsion model suggests that deformation and stress of growing actin...

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Autores principales: Zhu, Jie, Mogilner, Alex
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3486854/
https://www.ncbi.nlm.nih.gov/pubmed/23133366
http://dx.doi.org/10.1371/journal.pcbi.1002764
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author Zhu, Jie
Mogilner, Alex
author_facet Zhu, Jie
Mogilner, Alex
author_sort Zhu, Jie
collection PubMed
description Two theoretical models dominate current understanding of actin-based propulsion: microscopic polymerization ratchet model predicts that growing and writhing actin filaments generate forces and movements, while macroscopic elastic propulsion model suggests that deformation and stress of growing actin gel are responsible for the propulsion. We examine both experimentally and computationally the 2D movement of ellipsoidal beads propelled by actin tails and show that neither of the two models can explain the observed bistability of the orientation of the beads. To explain the data, we develop a 2D hybrid mesoscopic model by reconciling these two models such that individual actin filaments undergoing nucleation, elongation, attachment, detachment and capping are embedded into the boundary of a node-spring viscoelastic network representing the macroscopic actin gel. Stochastic simulations of this ‘in silico’ actin network show that the combined effects of the macroscopic elastic deformation and microscopic ratchets can explain the observed bistable orientation of the actin-propelled ellipsoidal beads. To test the theory further, we analyze observed distribution of the curvatures of the trajectories and show that the hybrid model's predictions fit the data. Finally, we demonstrate that the model can explain both concave-up and concave-down force-velocity relations for growing actin networks depending on the characteristic time scale and network recoil. To summarize, we propose that both microscopic polymerization ratchets and macroscopic stresses of the deformable actin network are responsible for the force and movement generation.
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spelling pubmed-34868542012-11-06 Mesoscopic Model of Actin-Based Propulsion Zhu, Jie Mogilner, Alex PLoS Comput Biol Research Article Two theoretical models dominate current understanding of actin-based propulsion: microscopic polymerization ratchet model predicts that growing and writhing actin filaments generate forces and movements, while macroscopic elastic propulsion model suggests that deformation and stress of growing actin gel are responsible for the propulsion. We examine both experimentally and computationally the 2D movement of ellipsoidal beads propelled by actin tails and show that neither of the two models can explain the observed bistability of the orientation of the beads. To explain the data, we develop a 2D hybrid mesoscopic model by reconciling these two models such that individual actin filaments undergoing nucleation, elongation, attachment, detachment and capping are embedded into the boundary of a node-spring viscoelastic network representing the macroscopic actin gel. Stochastic simulations of this ‘in silico’ actin network show that the combined effects of the macroscopic elastic deformation and microscopic ratchets can explain the observed bistable orientation of the actin-propelled ellipsoidal beads. To test the theory further, we analyze observed distribution of the curvatures of the trajectories and show that the hybrid model's predictions fit the data. Finally, we demonstrate that the model can explain both concave-up and concave-down force-velocity relations for growing actin networks depending on the characteristic time scale and network recoil. To summarize, we propose that both microscopic polymerization ratchets and macroscopic stresses of the deformable actin network are responsible for the force and movement generation. Public Library of Science 2012-11-01 /pmc/articles/PMC3486854/ /pubmed/23133366 http://dx.doi.org/10.1371/journal.pcbi.1002764 Text en © 2012 Zhu, Mogilner http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Zhu, Jie
Mogilner, Alex
Mesoscopic Model of Actin-Based Propulsion
title Mesoscopic Model of Actin-Based Propulsion
title_full Mesoscopic Model of Actin-Based Propulsion
title_fullStr Mesoscopic Model of Actin-Based Propulsion
title_full_unstemmed Mesoscopic Model of Actin-Based Propulsion
title_short Mesoscopic Model of Actin-Based Propulsion
title_sort mesoscopic model of actin-based propulsion
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3486854/
https://www.ncbi.nlm.nih.gov/pubmed/23133366
http://dx.doi.org/10.1371/journal.pcbi.1002764
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