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MetaVelvet: an extension of Velvet assembler to de novo metagenome assembly from short sequence reads

An important step in ‘metagenomics’ analysis is the assembly of multiple genomes from mixed sequence reads of multiple species in a microbial community. Most conventional pipelines use a single-genome assembler with carefully optimized parameters. A limitation of a single-genome assembler for de nov...

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Detalles Bibliográficos
Autores principales: Namiki, Toshiaki, Hachiya, Tsuyoshi, Tanaka, Hideaki, Sakakibara, Yasubumi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3488206/
https://www.ncbi.nlm.nih.gov/pubmed/22821567
http://dx.doi.org/10.1093/nar/gks678