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Utilisation of a thoracic oncology database to capture radiological and pathological images for evaluation of response to chemotherapy in patients with malignant pleural mesothelioma

OBJECTIVE: An area of need in cancer informatics is the ability to store images in a comprehensive database as part of translational cancer research. To meet this need, we have implemented a novel tandem database infrastructure that facilitates image storage and utilisation. BACKGROUND: We had previ...

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Autores principales: Carey, George B, Kazantsev, Stephanie, Surati, Mosmi, Rolle, Cleo E, Kanteti, Archana, Sadiq, Ahad, Bahroos, Neil, Raumann, Brigitte, Madduri, Ravi, Dave, Paul, Starkey, Adam, Hensing, Thomas, Husain, Aliya N, Vokes, Everett E, Vigneswaran, Wickii, Armato, Samuel G, Kindler, Hedy L, Salgia, Ravi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BMJ Publishing Group 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3488720/
https://www.ncbi.nlm.nih.gov/pubmed/23103606
http://dx.doi.org/10.1136/bmjopen-2012-001620
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author Carey, George B
Kazantsev, Stephanie
Surati, Mosmi
Rolle, Cleo E
Kanteti, Archana
Sadiq, Ahad
Bahroos, Neil
Raumann, Brigitte
Madduri, Ravi
Dave, Paul
Starkey, Adam
Hensing, Thomas
Husain, Aliya N
Vokes, Everett E
Vigneswaran, Wickii
Armato, Samuel G
Kindler, Hedy L
Salgia, Ravi
author_facet Carey, George B
Kazantsev, Stephanie
Surati, Mosmi
Rolle, Cleo E
Kanteti, Archana
Sadiq, Ahad
Bahroos, Neil
Raumann, Brigitte
Madduri, Ravi
Dave, Paul
Starkey, Adam
Hensing, Thomas
Husain, Aliya N
Vokes, Everett E
Vigneswaran, Wickii
Armato, Samuel G
Kindler, Hedy L
Salgia, Ravi
author_sort Carey, George B
collection PubMed
description OBJECTIVE: An area of need in cancer informatics is the ability to store images in a comprehensive database as part of translational cancer research. To meet this need, we have implemented a novel tandem database infrastructure that facilitates image storage and utilisation. BACKGROUND: We had previously implemented the Thoracic Oncology Program Database Project (TOPDP) database for our translational cancer research needs. While useful for many research endeavours, it is unable to store images, hence our need to implement an imaging database which could communicate easily with the TOPDP database. METHODS: The Thoracic Oncology Research Program (TORP) imaging database was designed using the Research Electronic Data Capture (REDCap) platform, which was developed by Vanderbilt University. To demonstrate proof of principle and evaluate utility, we performed a retrospective investigation into tumour response for malignant pleural mesothelioma (MPM) patients treated at the University of Chicago Medical Center with either of two analogous chemotherapy regimens and consented to at least one of two UCMC IRB protocols, 9571 and 13473A. RESULTS: A cohort of 22 MPM patients was identified using clinical data in the TOPDP database. After measurements were acquired, two representative CT images and 0–35 histological images per patient were successfully stored in the TORP database, along with clinical and demographic data. DISCUSSION: We implemented the TORP imaging database to be used in conjunction with our comprehensive TOPDP database. While it requires an additional effort to use two databases, our database infrastructure facilitates more comprehensive translational research. CONCLUSIONS: The investigation described herein demonstrates the successful implementation of this novel tandem imaging database infrastructure, as well as the potential utility of investigations enabled by it. The data model presented here can be utilised as the basis for further development of other larger, more streamlined databases in the future.
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spelling pubmed-34887202012-11-05 Utilisation of a thoracic oncology database to capture radiological and pathological images for evaluation of response to chemotherapy in patients with malignant pleural mesothelioma Carey, George B Kazantsev, Stephanie Surati, Mosmi Rolle, Cleo E Kanteti, Archana Sadiq, Ahad Bahroos, Neil Raumann, Brigitte Madduri, Ravi Dave, Paul Starkey, Adam Hensing, Thomas Husain, Aliya N Vokes, Everett E Vigneswaran, Wickii Armato, Samuel G Kindler, Hedy L Salgia, Ravi BMJ Open Oncology OBJECTIVE: An area of need in cancer informatics is the ability to store images in a comprehensive database as part of translational cancer research. To meet this need, we have implemented a novel tandem database infrastructure that facilitates image storage and utilisation. BACKGROUND: We had previously implemented the Thoracic Oncology Program Database Project (TOPDP) database for our translational cancer research needs. While useful for many research endeavours, it is unable to store images, hence our need to implement an imaging database which could communicate easily with the TOPDP database. METHODS: The Thoracic Oncology Research Program (TORP) imaging database was designed using the Research Electronic Data Capture (REDCap) platform, which was developed by Vanderbilt University. To demonstrate proof of principle and evaluate utility, we performed a retrospective investigation into tumour response for malignant pleural mesothelioma (MPM) patients treated at the University of Chicago Medical Center with either of two analogous chemotherapy regimens and consented to at least one of two UCMC IRB protocols, 9571 and 13473A. RESULTS: A cohort of 22 MPM patients was identified using clinical data in the TOPDP database. After measurements were acquired, two representative CT images and 0–35 histological images per patient were successfully stored in the TORP database, along with clinical and demographic data. DISCUSSION: We implemented the TORP imaging database to be used in conjunction with our comprehensive TOPDP database. While it requires an additional effort to use two databases, our database infrastructure facilitates more comprehensive translational research. CONCLUSIONS: The investigation described herein demonstrates the successful implementation of this novel tandem imaging database infrastructure, as well as the potential utility of investigations enabled by it. The data model presented here can be utilised as the basis for further development of other larger, more streamlined databases in the future. BMJ Publishing Group 2012 2012-10-26 /pmc/articles/PMC3488720/ /pubmed/23103606 http://dx.doi.org/10.1136/bmjopen-2012-001620 Text en Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions This is an open-access article distributed under the terms of the Creative Commons Attribution Non-commercial License, which permits use, distribution, and reproduction in any medium, provided the original work is properly cited, the use is non commercial and is otherwise in compliance with the license. See: http://creativecommons.org/licenses/by-nc/2.0/ and http://creativecommons.org/licenses/by-nc/2.0/legalcode.
spellingShingle Oncology
Carey, George B
Kazantsev, Stephanie
Surati, Mosmi
Rolle, Cleo E
Kanteti, Archana
Sadiq, Ahad
Bahroos, Neil
Raumann, Brigitte
Madduri, Ravi
Dave, Paul
Starkey, Adam
Hensing, Thomas
Husain, Aliya N
Vokes, Everett E
Vigneswaran, Wickii
Armato, Samuel G
Kindler, Hedy L
Salgia, Ravi
Utilisation of a thoracic oncology database to capture radiological and pathological images for evaluation of response to chemotherapy in patients with malignant pleural mesothelioma
title Utilisation of a thoracic oncology database to capture radiological and pathological images for evaluation of response to chemotherapy in patients with malignant pleural mesothelioma
title_full Utilisation of a thoracic oncology database to capture radiological and pathological images for evaluation of response to chemotherapy in patients with malignant pleural mesothelioma
title_fullStr Utilisation of a thoracic oncology database to capture radiological and pathological images for evaluation of response to chemotherapy in patients with malignant pleural mesothelioma
title_full_unstemmed Utilisation of a thoracic oncology database to capture radiological and pathological images for evaluation of response to chemotherapy in patients with malignant pleural mesothelioma
title_short Utilisation of a thoracic oncology database to capture radiological and pathological images for evaluation of response to chemotherapy in patients with malignant pleural mesothelioma
title_sort utilisation of a thoracic oncology database to capture radiological and pathological images for evaluation of response to chemotherapy in patients with malignant pleural mesothelioma
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3488720/
https://www.ncbi.nlm.nih.gov/pubmed/23103606
http://dx.doi.org/10.1136/bmjopen-2012-001620
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