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Molecular docking and virtual screening for novel protein tyrosine phosphatase 1B (PTP1B) inhibitors

Protein tyrosine phosphatase 1B (PTP1B) functions as major negative regulator of insulin and leptin signaling pathways. In view of this, PTP1B is an significant target for drug development against cancer, diabetes and obesity. The aim of the current study is to identify PTP1B inhibitors by means of...

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Autores principales: Rao, Pasupuleti Sreenivasa, Muvva, Charuvaka, Geethanjali, Karli, Bastipati, Suresh Babu, Kalashikam, Rajitha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Biomedical Informatics 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3488847/
https://www.ncbi.nlm.nih.gov/pubmed/23139594
http://dx.doi.org/10.6026/97320630008834
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author Rao, Pasupuleti Sreenivasa
Muvva, Charuvaka
Geethanjali, Karli
Bastipati, Suresh Babu
Kalashikam, Rajitha
author_facet Rao, Pasupuleti Sreenivasa
Muvva, Charuvaka
Geethanjali, Karli
Bastipati, Suresh Babu
Kalashikam, Rajitha
author_sort Rao, Pasupuleti Sreenivasa
collection PubMed
description Protein tyrosine phosphatase 1B (PTP1B) functions as major negative regulator of insulin and leptin signaling pathways. In view of this, PTP1B is an significant target for drug development against cancer, diabetes and obesity. The aim of the current study is to identify PTP1B inhibitors by means of virtual screening with docking. 523,366 molecules from ZINC database have been screened and based on DOCK grid scores and hydrogen bonding interactions five new potential inhibitors were identified. ZINC12502589, ZINC13213457, ZINC25721858, ZINC31392733 and ZINC04096400 were identified as potential lead molecules for inhibition of PTP1B. The identified molecules were subjected to Lipinski's rule of five parameters and found that they did not violate any rule. More specific analysis of pharmacological parameters may be scrutinized through a complete ADME/Tox evaluation. Pharma algorithm was used to Calculate ADME–Tox profiles for such molecules. In general, all the molecules presented advantages and as well as disadvantages when compared to each other. No marked difference in health effects and toxicity profiles were observed among these molecules.
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spelling pubmed-34888472012-11-08 Molecular docking and virtual screening for novel protein tyrosine phosphatase 1B (PTP1B) inhibitors Rao, Pasupuleti Sreenivasa Muvva, Charuvaka Geethanjali, Karli Bastipati, Suresh Babu Kalashikam, Rajitha Bioinformation Hypothesis Protein tyrosine phosphatase 1B (PTP1B) functions as major negative regulator of insulin and leptin signaling pathways. In view of this, PTP1B is an significant target for drug development against cancer, diabetes and obesity. The aim of the current study is to identify PTP1B inhibitors by means of virtual screening with docking. 523,366 molecules from ZINC database have been screened and based on DOCK grid scores and hydrogen bonding interactions five new potential inhibitors were identified. ZINC12502589, ZINC13213457, ZINC25721858, ZINC31392733 and ZINC04096400 were identified as potential lead molecules for inhibition of PTP1B. The identified molecules were subjected to Lipinski's rule of five parameters and found that they did not violate any rule. More specific analysis of pharmacological parameters may be scrutinized through a complete ADME/Tox evaluation. Pharma algorithm was used to Calculate ADME–Tox profiles for such molecules. In general, all the molecules presented advantages and as well as disadvantages when compared to each other. No marked difference in health effects and toxicity profiles were observed among these molecules. Biomedical Informatics 2012-09-11 /pmc/articles/PMC3488847/ /pubmed/23139594 http://dx.doi.org/10.6026/97320630008834 Text en © 2012 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Hypothesis
Rao, Pasupuleti Sreenivasa
Muvva, Charuvaka
Geethanjali, Karli
Bastipati, Suresh Babu
Kalashikam, Rajitha
Molecular docking and virtual screening for novel protein tyrosine phosphatase 1B (PTP1B) inhibitors
title Molecular docking and virtual screening for novel protein tyrosine phosphatase 1B (PTP1B) inhibitors
title_full Molecular docking and virtual screening for novel protein tyrosine phosphatase 1B (PTP1B) inhibitors
title_fullStr Molecular docking and virtual screening for novel protein tyrosine phosphatase 1B (PTP1B) inhibitors
title_full_unstemmed Molecular docking and virtual screening for novel protein tyrosine phosphatase 1B (PTP1B) inhibitors
title_short Molecular docking and virtual screening for novel protein tyrosine phosphatase 1B (PTP1B) inhibitors
title_sort molecular docking and virtual screening for novel protein tyrosine phosphatase 1b (ptp1b) inhibitors
topic Hypothesis
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3488847/
https://www.ncbi.nlm.nih.gov/pubmed/23139594
http://dx.doi.org/10.6026/97320630008834
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