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Phylogenetic study of nine species of freshwater monogeneans using secondary structure and motif prediction from India

The present study was performed to identify and validate monogenean species from different piscine hosts using molecular tools. Nine species of freshwater monogeneans were collected from gills and skin of freshwater fishes at Hastinapur, Meerut, India. After microscopic examination, molecular analys...

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Detalles Bibliográficos
Autores principales: Chaudhary, Anshu, Singh, Hridaya Shanker
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Biomedical Informatics 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3489091/
https://www.ncbi.nlm.nih.gov/pubmed/23144541
http://dx.doi.org/10.6026/97320630008862
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author Chaudhary, Anshu
Singh, Hridaya Shanker
author_facet Chaudhary, Anshu
Singh, Hridaya Shanker
author_sort Chaudhary, Anshu
collection PubMed
description The present study was performed to identify and validate monogenean species from different piscine hosts using molecular tools. Nine species of freshwater monogeneans were collected from gills and skin of freshwater fishes at Hastinapur, Meerut, India. After microscopic examination, molecular analysis was performed utilizing 28S gene marker. Phylogenetic analysis indicated the validation and systematic position of these nine different monogeneans belongs to the Dactylogyridae and Gyrodactylidae families. The findings also confirm that the 28S rDNA sequence is highly conserved and may prove to be useful in taxonomic studies of parasitic platyhelminthes. Besides this, the study is also supplemented by molecular morphometrics that is based on 28S secondary structure homologies of nine monogenean species. The data indicate that 28S motifs i.e., ≤ 50bp in size can also be considered a promising tool for monogenean species identification and their validation.
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spelling pubmed-34890912012-11-09 Phylogenetic study of nine species of freshwater monogeneans using secondary structure and motif prediction from India Chaudhary, Anshu Singh, Hridaya Shanker Bioinformation Hypothesis The present study was performed to identify and validate monogenean species from different piscine hosts using molecular tools. Nine species of freshwater monogeneans were collected from gills and skin of freshwater fishes at Hastinapur, Meerut, India. After microscopic examination, molecular analysis was performed utilizing 28S gene marker. Phylogenetic analysis indicated the validation and systematic position of these nine different monogeneans belongs to the Dactylogyridae and Gyrodactylidae families. The findings also confirm that the 28S rDNA sequence is highly conserved and may prove to be useful in taxonomic studies of parasitic platyhelminthes. Besides this, the study is also supplemented by molecular morphometrics that is based on 28S secondary structure homologies of nine monogenean species. The data indicate that 28S motifs i.e., ≤ 50bp in size can also be considered a promising tool for monogenean species identification and their validation. Biomedical Informatics 2012-09-21 /pmc/articles/PMC3489091/ /pubmed/23144541 http://dx.doi.org/10.6026/97320630008862 Text en © 2012 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Hypothesis
Chaudhary, Anshu
Singh, Hridaya Shanker
Phylogenetic study of nine species of freshwater monogeneans using secondary structure and motif prediction from India
title Phylogenetic study of nine species of freshwater monogeneans using secondary structure and motif prediction from India
title_full Phylogenetic study of nine species of freshwater monogeneans using secondary structure and motif prediction from India
title_fullStr Phylogenetic study of nine species of freshwater monogeneans using secondary structure and motif prediction from India
title_full_unstemmed Phylogenetic study of nine species of freshwater monogeneans using secondary structure and motif prediction from India
title_short Phylogenetic study of nine species of freshwater monogeneans using secondary structure and motif prediction from India
title_sort phylogenetic study of nine species of freshwater monogeneans using secondary structure and motif prediction from india
topic Hypothesis
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3489091/
https://www.ncbi.nlm.nih.gov/pubmed/23144541
http://dx.doi.org/10.6026/97320630008862
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