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Epidemic features affecting the performance of outbreak detection algorithms

BACKGROUND: Outbreak detection algorithms play an important role in effective automated surveillance. Although many algorithms have been designed to improve the performance of outbreak detection, few published studies have examined how epidemic features of infectious disease impact on the detection...

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Autores principales: Kuang, Jie, Yang, Wei Zhong, Zhou, Ding Lun, Li, Zhong Jie, Lan, Ya Jia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3489582/
https://www.ncbi.nlm.nih.gov/pubmed/22682110
http://dx.doi.org/10.1186/1471-2458-12-418
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author Kuang, Jie
Yang, Wei Zhong
Zhou, Ding Lun
Li, Zhong Jie
Lan, Ya Jia
author_facet Kuang, Jie
Yang, Wei Zhong
Zhou, Ding Lun
Li, Zhong Jie
Lan, Ya Jia
author_sort Kuang, Jie
collection PubMed
description BACKGROUND: Outbreak detection algorithms play an important role in effective automated surveillance. Although many algorithms have been designed to improve the performance of outbreak detection, few published studies have examined how epidemic features of infectious disease impact on the detection performance of algorithms. This study compared the performance of three outbreak detection algorithms stratified by epidemic features of infectious disease and examined the relationship between epidemic features and performance of outbreak detection algorithms. METHODS: Exponentially weighted moving average (EWMA), cumulative sum (CUSUM) and moving percentile method (MPM) algorithms were applied. We inserted simulated outbreaks into notifiable infectious disease data in China Infectious Disease Automated-alert and Response System (CIDARS), and compared the performance of the three algorithms with optimized parameters at a fixed false alarm rate of 5% classified by epidemic features of infectious disease. Multiple linear regression was adopted to analyse the relationship of the algorithms’ sensitivity and timeliness with the epidemic features of infectious diseases. RESULTS: The MPM had better detection performance than EWMA and CUSUM through all simulated outbreaks, with or without stratification by epidemic features (incubation period, baseline counts and outbreak magnitude). The epidemic features were associated with both sensitivity and timeliness. Compared with long incubation, short incubation had lower probability (β* = −0.13, P < 0.001) but needed shorter time to detect outbreaks (β* = −0.57, P < 0.001). Lower baseline counts were associated with higher probability (β* = −0.20, P < 0.001) and longer time (β* = 0.14, P < 0.001). The larger outbreak magnitude was correlated with higher probability (β* = 0.55, P < 0.001) and shorter time (β* = −0.23, P < 0.001). CONCLUSIONS: The results of this study suggest that the MPM is a prior algorithm for outbreak detection and differences of epidemic features in detection performance should be considered in automatic surveillance practice.
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spelling pubmed-34895822012-11-08 Epidemic features affecting the performance of outbreak detection algorithms Kuang, Jie Yang, Wei Zhong Zhou, Ding Lun Li, Zhong Jie Lan, Ya Jia BMC Public Health Research Article BACKGROUND: Outbreak detection algorithms play an important role in effective automated surveillance. Although many algorithms have been designed to improve the performance of outbreak detection, few published studies have examined how epidemic features of infectious disease impact on the detection performance of algorithms. This study compared the performance of three outbreak detection algorithms stratified by epidemic features of infectious disease and examined the relationship between epidemic features and performance of outbreak detection algorithms. METHODS: Exponentially weighted moving average (EWMA), cumulative sum (CUSUM) and moving percentile method (MPM) algorithms were applied. We inserted simulated outbreaks into notifiable infectious disease data in China Infectious Disease Automated-alert and Response System (CIDARS), and compared the performance of the three algorithms with optimized parameters at a fixed false alarm rate of 5% classified by epidemic features of infectious disease. Multiple linear regression was adopted to analyse the relationship of the algorithms’ sensitivity and timeliness with the epidemic features of infectious diseases. RESULTS: The MPM had better detection performance than EWMA and CUSUM through all simulated outbreaks, with or without stratification by epidemic features (incubation period, baseline counts and outbreak magnitude). The epidemic features were associated with both sensitivity and timeliness. Compared with long incubation, short incubation had lower probability (β* = −0.13, P < 0.001) but needed shorter time to detect outbreaks (β* = −0.57, P < 0.001). Lower baseline counts were associated with higher probability (β* = −0.20, P < 0.001) and longer time (β* = 0.14, P < 0.001). The larger outbreak magnitude was correlated with higher probability (β* = 0.55, P < 0.001) and shorter time (β* = −0.23, P < 0.001). CONCLUSIONS: The results of this study suggest that the MPM is a prior algorithm for outbreak detection and differences of epidemic features in detection performance should be considered in automatic surveillance practice. BioMed Central 2012-06-08 /pmc/articles/PMC3489582/ /pubmed/22682110 http://dx.doi.org/10.1186/1471-2458-12-418 Text en Copyright ©2012 Kuang et al. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Kuang, Jie
Yang, Wei Zhong
Zhou, Ding Lun
Li, Zhong Jie
Lan, Ya Jia
Epidemic features affecting the performance of outbreak detection algorithms
title Epidemic features affecting the performance of outbreak detection algorithms
title_full Epidemic features affecting the performance of outbreak detection algorithms
title_fullStr Epidemic features affecting the performance of outbreak detection algorithms
title_full_unstemmed Epidemic features affecting the performance of outbreak detection algorithms
title_short Epidemic features affecting the performance of outbreak detection algorithms
title_sort epidemic features affecting the performance of outbreak detection algorithms
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3489582/
https://www.ncbi.nlm.nih.gov/pubmed/22682110
http://dx.doi.org/10.1186/1471-2458-12-418
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