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Fully exploratory network independent component analysis of the 1000 functional connectomes database

The 1000 Functional Connectomes Project is a collection of resting-state fMRI datasets from more than 1000 subjects acquired in more than 30 independent studies from around the globe. This large, heterogeneous sample of resting-state data offers the unique opportunity to study the consistencies of r...

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Autores principales: Kalcher, Klaudius, Huf, Wolfgang, Boubela, Roland N., Filzmoser, Peter, Pezawas, Lukas, Biswal, Bharat, Kasper, Siegfried, Moser, Ewald, Windischberger, Christian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3490136/
https://www.ncbi.nlm.nih.gov/pubmed/23133413
http://dx.doi.org/10.3389/fnhum.2012.00301
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author Kalcher, Klaudius
Huf, Wolfgang
Boubela, Roland N.
Filzmoser, Peter
Pezawas, Lukas
Biswal, Bharat
Kasper, Siegfried
Moser, Ewald
Windischberger, Christian
author_facet Kalcher, Klaudius
Huf, Wolfgang
Boubela, Roland N.
Filzmoser, Peter
Pezawas, Lukas
Biswal, Bharat
Kasper, Siegfried
Moser, Ewald
Windischberger, Christian
author_sort Kalcher, Klaudius
collection PubMed
description The 1000 Functional Connectomes Project is a collection of resting-state fMRI datasets from more than 1000 subjects acquired in more than 30 independent studies from around the globe. This large, heterogeneous sample of resting-state data offers the unique opportunity to study the consistencies of resting-state networks at both subject and study level. In extension to the seminal paper by Biswal et al. (2010), where a repeated temporal concatenation group independent component analysis (ICA) approach on reduced subsets (using 20 as a pre-specified number of components) was used due to computational resource limitations, we herein apply Fully Exploratory Network ICA (FENICA) to 1000 single-subject independent component analyses. This, along with the possibility of using datasets of different lengths without truncation, enabled us to benefit from the full dataset available, thereby obtaining 16 networks consistent over the whole group of 1000 subjects. Furthermore, we demonstrated that the most consistent among these networks at both subject and study level matched networks most often reported in the literature, and found additional components emerging in prefrontal and parietal areas. Finally, we identified the influence of scan duration on the number of components as a source of heterogeneity between studies.
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spelling pubmed-34901362012-11-06 Fully exploratory network independent component analysis of the 1000 functional connectomes database Kalcher, Klaudius Huf, Wolfgang Boubela, Roland N. Filzmoser, Peter Pezawas, Lukas Biswal, Bharat Kasper, Siegfried Moser, Ewald Windischberger, Christian Front Hum Neurosci Neuroscience The 1000 Functional Connectomes Project is a collection of resting-state fMRI datasets from more than 1000 subjects acquired in more than 30 independent studies from around the globe. This large, heterogeneous sample of resting-state data offers the unique opportunity to study the consistencies of resting-state networks at both subject and study level. In extension to the seminal paper by Biswal et al. (2010), where a repeated temporal concatenation group independent component analysis (ICA) approach on reduced subsets (using 20 as a pre-specified number of components) was used due to computational resource limitations, we herein apply Fully Exploratory Network ICA (FENICA) to 1000 single-subject independent component analyses. This, along with the possibility of using datasets of different lengths without truncation, enabled us to benefit from the full dataset available, thereby obtaining 16 networks consistent over the whole group of 1000 subjects. Furthermore, we demonstrated that the most consistent among these networks at both subject and study level matched networks most often reported in the literature, and found additional components emerging in prefrontal and parietal areas. Finally, we identified the influence of scan duration on the number of components as a source of heterogeneity between studies. Frontiers Media S.A. 2012-11-06 /pmc/articles/PMC3490136/ /pubmed/23133413 http://dx.doi.org/10.3389/fnhum.2012.00301 Text en Copyright © 2012 Kalcher, Huf, Boubela, Filzmoser, Pezawas, Biswal, Kasper, Moser and Windischberger. http://www.frontiersin.org/licenseagreement This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in other forums, provided the original authors and source are credited and subject to any copyright notices concerning any third-party graphics etc.
spellingShingle Neuroscience
Kalcher, Klaudius
Huf, Wolfgang
Boubela, Roland N.
Filzmoser, Peter
Pezawas, Lukas
Biswal, Bharat
Kasper, Siegfried
Moser, Ewald
Windischberger, Christian
Fully exploratory network independent component analysis of the 1000 functional connectomes database
title Fully exploratory network independent component analysis of the 1000 functional connectomes database
title_full Fully exploratory network independent component analysis of the 1000 functional connectomes database
title_fullStr Fully exploratory network independent component analysis of the 1000 functional connectomes database
title_full_unstemmed Fully exploratory network independent component analysis of the 1000 functional connectomes database
title_short Fully exploratory network independent component analysis of the 1000 functional connectomes database
title_sort fully exploratory network independent component analysis of the 1000 functional connectomes database
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3490136/
https://www.ncbi.nlm.nih.gov/pubmed/23133413
http://dx.doi.org/10.3389/fnhum.2012.00301
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