Cargando…

The Role of Electrostatic Interactions on Klentaq1 Insight for Domain Separation

We investigated the relationship between the thermostability of Klentaq1 and factors stabilizing interdomain interactions. When thermal adaptation of Klentaq1 was analyzed at the atomic level, the protein was stable at 300 and 350 K. It gradually unfolded at 373 K and almost spontaneously unfolded a...

Descripción completa

Detalles Bibliográficos
Autores principales: Nurbaiti, Santi, Martoprawiro, Muhamad A., Akhmaloka, Hertadi, Rukman
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Libertas Academica 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3491847/
https://www.ncbi.nlm.nih.gov/pubmed/23136465
http://dx.doi.org/10.4137/BBI.S9390
_version_ 1782249022483857408
author Nurbaiti, Santi
Martoprawiro, Muhamad A.
Akhmaloka,
Hertadi, Rukman
author_facet Nurbaiti, Santi
Martoprawiro, Muhamad A.
Akhmaloka,
Hertadi, Rukman
author_sort Nurbaiti, Santi
collection PubMed
description We investigated the relationship between the thermostability of Klentaq1 and factors stabilizing interdomain interactions. When thermal adaptation of Klentaq1 was analyzed at the atomic level, the protein was stable at 300 and 350 K. It gradually unfolded at 373 K and almost spontaneously unfolded at 400 K. Domain separation was induced by disrupting electrostatic interactions in two salt bridges formed by Lys354-Glu445 and Asp371-Arg435 on the interface domain. The role of these interactions in protein stability was evaluated by comparing free energy solvation (ΔΔG(solv)) between wild type and mutants. Substitution of Asp371 by Glu or Asn, and also Glu445 by Asn resulted in a positive value of ΔΔG(solv), suggesting that mutations destabilized the protein structure. Nevertheless, substitution of Glu445 by Asp gave a negative value to ΔΔG(solv) reflecting increasing protein stability. Our results demonstrate that interactions at the interface domains of Klentaq1 are essential factors correlated with the Klentaq1 thermostability.
format Online
Article
Text
id pubmed-3491847
institution National Center for Biotechnology Information
language English
publishDate 2012
publisher Libertas Academica
record_format MEDLINE/PubMed
spelling pubmed-34918472012-11-07 The Role of Electrostatic Interactions on Klentaq1 Insight for Domain Separation Nurbaiti, Santi Martoprawiro, Muhamad A. Akhmaloka, Hertadi, Rukman Bioinform Biol Insights Original Research We investigated the relationship between the thermostability of Klentaq1 and factors stabilizing interdomain interactions. When thermal adaptation of Klentaq1 was analyzed at the atomic level, the protein was stable at 300 and 350 K. It gradually unfolded at 373 K and almost spontaneously unfolded at 400 K. Domain separation was induced by disrupting electrostatic interactions in two salt bridges formed by Lys354-Glu445 and Asp371-Arg435 on the interface domain. The role of these interactions in protein stability was evaluated by comparing free energy solvation (ΔΔG(solv)) between wild type and mutants. Substitution of Asp371 by Glu or Asn, and also Glu445 by Asn resulted in a positive value of ΔΔG(solv), suggesting that mutations destabilized the protein structure. Nevertheless, substitution of Glu445 by Asp gave a negative value to ΔΔG(solv) reflecting increasing protein stability. Our results demonstrate that interactions at the interface domains of Klentaq1 are essential factors correlated with the Klentaq1 thermostability. Libertas Academica 2012-10-30 /pmc/articles/PMC3491847/ /pubmed/23136465 http://dx.doi.org/10.4137/BBI.S9390 Text en © 2012 the author(s), publisher and licensee Libertas Academica Ltd. This is an open access article. Unrestricted non-commercial use is permitted provided the original work is properly cited.
spellingShingle Original Research
Nurbaiti, Santi
Martoprawiro, Muhamad A.
Akhmaloka,
Hertadi, Rukman
The Role of Electrostatic Interactions on Klentaq1 Insight for Domain Separation
title The Role of Electrostatic Interactions on Klentaq1 Insight for Domain Separation
title_full The Role of Electrostatic Interactions on Klentaq1 Insight for Domain Separation
title_fullStr The Role of Electrostatic Interactions on Klentaq1 Insight for Domain Separation
title_full_unstemmed The Role of Electrostatic Interactions on Klentaq1 Insight for Domain Separation
title_short The Role of Electrostatic Interactions on Klentaq1 Insight for Domain Separation
title_sort role of electrostatic interactions on klentaq1 insight for domain separation
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3491847/
https://www.ncbi.nlm.nih.gov/pubmed/23136465
http://dx.doi.org/10.4137/BBI.S9390
work_keys_str_mv AT nurbaitisanti theroleofelectrostaticinteractionsonklentaq1insightfordomainseparation
AT martoprawiromuhamada theroleofelectrostaticinteractionsonklentaq1insightfordomainseparation
AT akhmaloka theroleofelectrostaticinteractionsonklentaq1insightfordomainseparation
AT hertadirukman theroleofelectrostaticinteractionsonklentaq1insightfordomainseparation
AT nurbaitisanti roleofelectrostaticinteractionsonklentaq1insightfordomainseparation
AT martoprawiromuhamada roleofelectrostaticinteractionsonklentaq1insightfordomainseparation
AT akhmaloka roleofelectrostaticinteractionsonklentaq1insightfordomainseparation
AT hertadirukman roleofelectrostaticinteractionsonklentaq1insightfordomainseparation