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The Role of Electrostatic Interactions on Klentaq1 Insight for Domain Separation
We investigated the relationship between the thermostability of Klentaq1 and factors stabilizing interdomain interactions. When thermal adaptation of Klentaq1 was analyzed at the atomic level, the protein was stable at 300 and 350 K. It gradually unfolded at 373 K and almost spontaneously unfolded a...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Libertas Academica
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3491847/ https://www.ncbi.nlm.nih.gov/pubmed/23136465 http://dx.doi.org/10.4137/BBI.S9390 |
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author | Nurbaiti, Santi Martoprawiro, Muhamad A. Akhmaloka, Hertadi, Rukman |
author_facet | Nurbaiti, Santi Martoprawiro, Muhamad A. Akhmaloka, Hertadi, Rukman |
author_sort | Nurbaiti, Santi |
collection | PubMed |
description | We investigated the relationship between the thermostability of Klentaq1 and factors stabilizing interdomain interactions. When thermal adaptation of Klentaq1 was analyzed at the atomic level, the protein was stable at 300 and 350 K. It gradually unfolded at 373 K and almost spontaneously unfolded at 400 K. Domain separation was induced by disrupting electrostatic interactions in two salt bridges formed by Lys354-Glu445 and Asp371-Arg435 on the interface domain. The role of these interactions in protein stability was evaluated by comparing free energy solvation (ΔΔG(solv)) between wild type and mutants. Substitution of Asp371 by Glu or Asn, and also Glu445 by Asn resulted in a positive value of ΔΔG(solv), suggesting that mutations destabilized the protein structure. Nevertheless, substitution of Glu445 by Asp gave a negative value to ΔΔG(solv) reflecting increasing protein stability. Our results demonstrate that interactions at the interface domains of Klentaq1 are essential factors correlated with the Klentaq1 thermostability. |
format | Online Article Text |
id | pubmed-3491847 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Libertas Academica |
record_format | MEDLINE/PubMed |
spelling | pubmed-34918472012-11-07 The Role of Electrostatic Interactions on Klentaq1 Insight for Domain Separation Nurbaiti, Santi Martoprawiro, Muhamad A. Akhmaloka, Hertadi, Rukman Bioinform Biol Insights Original Research We investigated the relationship between the thermostability of Klentaq1 and factors stabilizing interdomain interactions. When thermal adaptation of Klentaq1 was analyzed at the atomic level, the protein was stable at 300 and 350 K. It gradually unfolded at 373 K and almost spontaneously unfolded at 400 K. Domain separation was induced by disrupting electrostatic interactions in two salt bridges formed by Lys354-Glu445 and Asp371-Arg435 on the interface domain. The role of these interactions in protein stability was evaluated by comparing free energy solvation (ΔΔG(solv)) between wild type and mutants. Substitution of Asp371 by Glu or Asn, and also Glu445 by Asn resulted in a positive value of ΔΔG(solv), suggesting that mutations destabilized the protein structure. Nevertheless, substitution of Glu445 by Asp gave a negative value to ΔΔG(solv) reflecting increasing protein stability. Our results demonstrate that interactions at the interface domains of Klentaq1 are essential factors correlated with the Klentaq1 thermostability. Libertas Academica 2012-10-30 /pmc/articles/PMC3491847/ /pubmed/23136465 http://dx.doi.org/10.4137/BBI.S9390 Text en © 2012 the author(s), publisher and licensee Libertas Academica Ltd. This is an open access article. Unrestricted non-commercial use is permitted provided the original work is properly cited. |
spellingShingle | Original Research Nurbaiti, Santi Martoprawiro, Muhamad A. Akhmaloka, Hertadi, Rukman The Role of Electrostatic Interactions on Klentaq1 Insight for Domain Separation |
title | The Role of Electrostatic Interactions on Klentaq1 Insight for Domain Separation |
title_full | The Role of Electrostatic Interactions on Klentaq1 Insight for Domain Separation |
title_fullStr | The Role of Electrostatic Interactions on Klentaq1 Insight for Domain Separation |
title_full_unstemmed | The Role of Electrostatic Interactions on Klentaq1 Insight for Domain Separation |
title_short | The Role of Electrostatic Interactions on Klentaq1 Insight for Domain Separation |
title_sort | role of electrostatic interactions on klentaq1 insight for domain separation |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3491847/ https://www.ncbi.nlm.nih.gov/pubmed/23136465 http://dx.doi.org/10.4137/BBI.S9390 |
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