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Analysis of the Clonality of Candida tropicalis Strains from a General Hospital in Beijing Using Multilocus Sequence Typing
Multilocus sequence typing (MLST) based on six loci was used to analyze the relationship of 58 Candida tropicalis isolates from individual patients in a general hospital in Beijing, China. A total of 52 diploid sequence types (DSTs) were generated by the MLST, all of which were new to the central da...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3494695/ https://www.ncbi.nlm.nih.gov/pubmed/23152759 http://dx.doi.org/10.1371/journal.pone.0047767 |
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author | Wu, Yuan Zhou, Haijian Wang, Jing Li, Lianqing Li, Wenge Cui, Zhigang Chen, Xia Cen, Ruiqi Lu, Jinxing Cheng, Ying |
author_facet | Wu, Yuan Zhou, Haijian Wang, Jing Li, Lianqing Li, Wenge Cui, Zhigang Chen, Xia Cen, Ruiqi Lu, Jinxing Cheng, Ying |
author_sort | Wu, Yuan |
collection | PubMed |
description | Multilocus sequence typing (MLST) based on six loci was used to analyze the relationship of 58 Candida tropicalis isolates from individual patients in a general hospital in Beijing, China. A total of 52 diploid sequence types (DSTs) were generated by the MLST, all of which were new to the central database. Unweighted Pair Group Method with Arithmetic Mean (UPGMA) dendrograms were constructed, which showed that the 58 isolates were distributed robustly and 6 main groups were clustered regardless of the specimen source and medical department. The minimum spanning tree (MST) of the 58 isolates (52 DSTs) and all 401 isolates (268 DSTs) in the C. tropicalis central database (http://pubmlst.org/ctropicalis/) indicated that the isolates in this study clustered in three relative pure clonal complexes, and 2 clustered with isolates from Taiwan, Belgium, Brazil, and the US. This study presents the first MLST analysis of C. tropicalis isolates from Mainland China, which may be useful for further studies on the similarity, genetic relationship, and molecular epidemiology of C. tropicalis strains worldwide. |
format | Online Article Text |
id | pubmed-3494695 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-34946952012-11-14 Analysis of the Clonality of Candida tropicalis Strains from a General Hospital in Beijing Using Multilocus Sequence Typing Wu, Yuan Zhou, Haijian Wang, Jing Li, Lianqing Li, Wenge Cui, Zhigang Chen, Xia Cen, Ruiqi Lu, Jinxing Cheng, Ying PLoS One Research Article Multilocus sequence typing (MLST) based on six loci was used to analyze the relationship of 58 Candida tropicalis isolates from individual patients in a general hospital in Beijing, China. A total of 52 diploid sequence types (DSTs) were generated by the MLST, all of which were new to the central database. Unweighted Pair Group Method with Arithmetic Mean (UPGMA) dendrograms were constructed, which showed that the 58 isolates were distributed robustly and 6 main groups were clustered regardless of the specimen source and medical department. The minimum spanning tree (MST) of the 58 isolates (52 DSTs) and all 401 isolates (268 DSTs) in the C. tropicalis central database (http://pubmlst.org/ctropicalis/) indicated that the isolates in this study clustered in three relative pure clonal complexes, and 2 clustered with isolates from Taiwan, Belgium, Brazil, and the US. This study presents the first MLST analysis of C. tropicalis isolates from Mainland China, which may be useful for further studies on the similarity, genetic relationship, and molecular epidemiology of C. tropicalis strains worldwide. Public Library of Science 2012-11-09 /pmc/articles/PMC3494695/ /pubmed/23152759 http://dx.doi.org/10.1371/journal.pone.0047767 Text en © 2012 Wu et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Wu, Yuan Zhou, Haijian Wang, Jing Li, Lianqing Li, Wenge Cui, Zhigang Chen, Xia Cen, Ruiqi Lu, Jinxing Cheng, Ying Analysis of the Clonality of Candida tropicalis Strains from a General Hospital in Beijing Using Multilocus Sequence Typing |
title | Analysis of the Clonality of Candida tropicalis Strains from a General Hospital in Beijing Using Multilocus Sequence Typing |
title_full | Analysis of the Clonality of Candida tropicalis Strains from a General Hospital in Beijing Using Multilocus Sequence Typing |
title_fullStr | Analysis of the Clonality of Candida tropicalis Strains from a General Hospital in Beijing Using Multilocus Sequence Typing |
title_full_unstemmed | Analysis of the Clonality of Candida tropicalis Strains from a General Hospital in Beijing Using Multilocus Sequence Typing |
title_short | Analysis of the Clonality of Candida tropicalis Strains from a General Hospital in Beijing Using Multilocus Sequence Typing |
title_sort | analysis of the clonality of candida tropicalis strains from a general hospital in beijing using multilocus sequence typing |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3494695/ https://www.ncbi.nlm.nih.gov/pubmed/23152759 http://dx.doi.org/10.1371/journal.pone.0047767 |
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