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Polymorphisms in ERCC1 and XPF Genes and Risk of Gastric Cancer in an Eastern Chinese Population

BACKGROUND: Inherited functional single nucleotide polymorphisms (SNPs) in DNA repair genes may alter DNA repair capacity and thus contribute to cancer risk. METHODS: Three ERCC1 functional SNPs (rs2298881C>A, rs3212986C>A and rs11615G>A) and two XPF/ERCC4 functional SNPs (rs2276466C>G a...

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Autores principales: He, Jing, Xu, Yu, Qiu, Li-Xin, Li, Jin, Zhou, Xiao-Yan, Sun, Meng-Hong, Wang, Jiu-Cun, Yang, Ya-Jun, Jin, Li, Wei, Qing-Yi, Wang, Yanong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3499547/
https://www.ncbi.nlm.nih.gov/pubmed/23166636
http://dx.doi.org/10.1371/journal.pone.0049308
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author He, Jing
Xu, Yu
Qiu, Li-Xin
Li, Jin
Zhou, Xiao-Yan
Sun, Meng-Hong
Wang, Jiu-Cun
Yang, Ya-Jun
Jin, Li
Wei, Qing-Yi
Wang, Yanong
author_facet He, Jing
Xu, Yu
Qiu, Li-Xin
Li, Jin
Zhou, Xiao-Yan
Sun, Meng-Hong
Wang, Jiu-Cun
Yang, Ya-Jun
Jin, Li
Wei, Qing-Yi
Wang, Yanong
author_sort He, Jing
collection PubMed
description BACKGROUND: Inherited functional single nucleotide polymorphisms (SNPs) in DNA repair genes may alter DNA repair capacity and thus contribute to cancer risk. METHODS: Three ERCC1 functional SNPs (rs2298881C>A, rs3212986C>A and rs11615G>A) and two XPF/ERCC4 functional SNPs (rs2276466C>G and rs6498486A>C) were genotyped for 1125 gastric adenocarcinoma cases and 1196 cancer-free controls by Taqman assays. Odds ratios (OR) and 95% confidence intervals (CI) were used to estimate risk associations, and false-positive report probabilities (FPRP) were calculated for assessing significant findings. RESULTS: ERCC1 rs2298881C and rs11615A variant genotypes were associated with increased gastric cancer risk (adjusted OR = 1.33, 95% CI = 1.05–1.67 for rs2298881 AC/CC and adjusted OR = 1.23, 95% CI = 1.05–1.46 for rs11615 AG/AA, compared with their common genotype AA and GG, respectively). Patients with 2–3 ERCC1 risk genotypes had significant increased risk (adjusted OR = 1.56, 95% CI = 1.27–1.93), compared with those with 0–1 ERCC1 risk genotypes, and this risk was more significantly in subgroups of never drinkers, non-gastric cardia adenocarcinoma (NGCA) and clinical stage I+II. All these risks were not observed for XPF SNPs. CONCLUSIONS: These findings suggest that functional ERCC1 SNPs may contribute to risk of gastric cancer. Larger and well-designed studies with different ethnic populations are needed to validate our findings.
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spelling pubmed-34995472012-11-19 Polymorphisms in ERCC1 and XPF Genes and Risk of Gastric Cancer in an Eastern Chinese Population He, Jing Xu, Yu Qiu, Li-Xin Li, Jin Zhou, Xiao-Yan Sun, Meng-Hong Wang, Jiu-Cun Yang, Ya-Jun Jin, Li Wei, Qing-Yi Wang, Yanong PLoS One Research Article BACKGROUND: Inherited functional single nucleotide polymorphisms (SNPs) in DNA repair genes may alter DNA repair capacity and thus contribute to cancer risk. METHODS: Three ERCC1 functional SNPs (rs2298881C>A, rs3212986C>A and rs11615G>A) and two XPF/ERCC4 functional SNPs (rs2276466C>G and rs6498486A>C) were genotyped for 1125 gastric adenocarcinoma cases and 1196 cancer-free controls by Taqman assays. Odds ratios (OR) and 95% confidence intervals (CI) were used to estimate risk associations, and false-positive report probabilities (FPRP) were calculated for assessing significant findings. RESULTS: ERCC1 rs2298881C and rs11615A variant genotypes were associated with increased gastric cancer risk (adjusted OR = 1.33, 95% CI = 1.05–1.67 for rs2298881 AC/CC and adjusted OR = 1.23, 95% CI = 1.05–1.46 for rs11615 AG/AA, compared with their common genotype AA and GG, respectively). Patients with 2–3 ERCC1 risk genotypes had significant increased risk (adjusted OR = 1.56, 95% CI = 1.27–1.93), compared with those with 0–1 ERCC1 risk genotypes, and this risk was more significantly in subgroups of never drinkers, non-gastric cardia adenocarcinoma (NGCA) and clinical stage I+II. All these risks were not observed for XPF SNPs. CONCLUSIONS: These findings suggest that functional ERCC1 SNPs may contribute to risk of gastric cancer. Larger and well-designed studies with different ethnic populations are needed to validate our findings. Public Library of Science 2012-11-15 /pmc/articles/PMC3499547/ /pubmed/23166636 http://dx.doi.org/10.1371/journal.pone.0049308 Text en © 2012 He et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
He, Jing
Xu, Yu
Qiu, Li-Xin
Li, Jin
Zhou, Xiao-Yan
Sun, Meng-Hong
Wang, Jiu-Cun
Yang, Ya-Jun
Jin, Li
Wei, Qing-Yi
Wang, Yanong
Polymorphisms in ERCC1 and XPF Genes and Risk of Gastric Cancer in an Eastern Chinese Population
title Polymorphisms in ERCC1 and XPF Genes and Risk of Gastric Cancer in an Eastern Chinese Population
title_full Polymorphisms in ERCC1 and XPF Genes and Risk of Gastric Cancer in an Eastern Chinese Population
title_fullStr Polymorphisms in ERCC1 and XPF Genes and Risk of Gastric Cancer in an Eastern Chinese Population
title_full_unstemmed Polymorphisms in ERCC1 and XPF Genes and Risk of Gastric Cancer in an Eastern Chinese Population
title_short Polymorphisms in ERCC1 and XPF Genes and Risk of Gastric Cancer in an Eastern Chinese Population
title_sort polymorphisms in ercc1 and xpf genes and risk of gastric cancer in an eastern chinese population
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3499547/
https://www.ncbi.nlm.nih.gov/pubmed/23166636
http://dx.doi.org/10.1371/journal.pone.0049308
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