Biomarker Identification Using Text Mining

Identifying molecular biomarkers has become one of the important tasks for scientists to assess the different phenotypic states of cells or organisms correlated to the genotypes of diseases from large-scale biological data. In this paper, we proposed a text-mining-based method to discover biomarkers...

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Detalles Bibliográficos
Autores principales: Li, Hui, Liu, Chunmei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2012
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3502861/
https://www.ncbi.nlm.nih.gov/pubmed/23197989
http://dx.doi.org/10.1155/2012/135780
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author Li, Hui
Liu, Chunmei
author_facet Li, Hui
Liu, Chunmei
author_sort Li, Hui
collection PubMed
description Identifying molecular biomarkers has become one of the important tasks for scientists to assess the different phenotypic states of cells or organisms correlated to the genotypes of diseases from large-scale biological data. In this paper, we proposed a text-mining-based method to discover biomarkers from PubMed. First, we construct a database based on a dictionary, and then we used a finite state machine to identify the biomarkers. Our method of text mining provides a highly reliable approach to discover the biomarkers in the PubMed database.
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spelling pubmed-35028612012-11-29 Biomarker Identification Using Text Mining Li, Hui Liu, Chunmei Comput Math Methods Med Research Article Identifying molecular biomarkers has become one of the important tasks for scientists to assess the different phenotypic states of cells or organisms correlated to the genotypes of diseases from large-scale biological data. In this paper, we proposed a text-mining-based method to discover biomarkers from PubMed. First, we construct a database based on a dictionary, and then we used a finite state machine to identify the biomarkers. Our method of text mining provides a highly reliable approach to discover the biomarkers in the PubMed database. Hindawi Publishing Corporation 2012 2012-11-11 /pmc/articles/PMC3502861/ /pubmed/23197989 http://dx.doi.org/10.1155/2012/135780 Text en Copyright © 2012 H. Li and C. Liu. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Li, Hui
Liu, Chunmei
Biomarker Identification Using Text Mining
title Biomarker Identification Using Text Mining
title_full Biomarker Identification Using Text Mining
title_fullStr Biomarker Identification Using Text Mining
title_full_unstemmed Biomarker Identification Using Text Mining
title_short Biomarker Identification Using Text Mining
title_sort biomarker identification using text mining
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3502861/
https://www.ncbi.nlm.nih.gov/pubmed/23197989
http://dx.doi.org/10.1155/2012/135780
work_keys_str_mv AT lihui biomarkeridentificationusingtextmining
AT liuchunmei biomarkeridentificationusingtextmining

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