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Genetic Variation within Native Populations of Endemic Silkmoth Antheraea assamensis (Helfer) from Northeast India Indicates Need for In Situ Conservation

A. assamensis is a phytophagous Lepidoptera from Northeast India reared on host trees of Lauraceae family for its characteristic cocoon silk. Source of these cocoons are domesticated farm stocks that crash frequently and/or wild insect populations that provide new cultures. The need to reduce depend...

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Autores principales: Singh, Y. Tunginba, Mazumdar-Leighton, Sudeshna, Saikia, Mahaswetta, Pant, Prashant, Kashung, Sochanngam, Neog, Kartik, Chakravorty, Rajen, Nair, Suresh, Nagaraju, Javaregowda, Babu, Cheerukeri Raghavendra
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3503872/
https://www.ncbi.nlm.nih.gov/pubmed/23185503
http://dx.doi.org/10.1371/journal.pone.0049972
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author Singh, Y. Tunginba
Mazumdar-Leighton, Sudeshna
Saikia, Mahaswetta
Pant, Prashant
Kashung, Sochanngam
Neog, Kartik
Chakravorty, Rajen
Nair, Suresh
Nagaraju, Javaregowda
Babu, Cheerukeri Raghavendra
author_facet Singh, Y. Tunginba
Mazumdar-Leighton, Sudeshna
Saikia, Mahaswetta
Pant, Prashant
Kashung, Sochanngam
Neog, Kartik
Chakravorty, Rajen
Nair, Suresh
Nagaraju, Javaregowda
Babu, Cheerukeri Raghavendra
author_sort Singh, Y. Tunginba
collection PubMed
description A. assamensis is a phytophagous Lepidoptera from Northeast India reared on host trees of Lauraceae family for its characteristic cocoon silk. Source of these cocoons are domesticated farm stocks that crash frequently and/or wild insect populations that provide new cultures. The need to reduce dependence on wild populations for cocoons necessitates assessment of genetic diversity in cultivated and wild populations. Molecular markers based on PCR of Inter-simple sequence repeats (ISSR) and simple sequence repeats (SSR) were used with four populations of wild insects and eleven populations of cultivated insects. Wild populations had high genetic diversity estimates (H(i) = 0.25; H(S) = 0.28; H(E) = 0.42) and at least one population contained private alleles. Both marker systems indicated that genetic variability within populations examined was significantly high. Among cultivated populations, insects of the Upper Assam region (H(i) = 0.19; H(S) = 0.18; H(E) = 0) were genetically distinct (F (ST) = 0.38 with both marker systems) from insects of Lower Assam (H(i) = 0.24; H(S) = 0.25; H(E) = 0.3). Sequencing of polymorphic amplicons suggested transposition as a mechanism for maintaining genomic diversity. Implications for conservation of native populations in the wild and preserving in-farm diversity are discussed.
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spelling pubmed-35038722012-11-26 Genetic Variation within Native Populations of Endemic Silkmoth Antheraea assamensis (Helfer) from Northeast India Indicates Need for In Situ Conservation Singh, Y. Tunginba Mazumdar-Leighton, Sudeshna Saikia, Mahaswetta Pant, Prashant Kashung, Sochanngam Neog, Kartik Chakravorty, Rajen Nair, Suresh Nagaraju, Javaregowda Babu, Cheerukeri Raghavendra PLoS One Research Article A. assamensis is a phytophagous Lepidoptera from Northeast India reared on host trees of Lauraceae family for its characteristic cocoon silk. Source of these cocoons are domesticated farm stocks that crash frequently and/or wild insect populations that provide new cultures. The need to reduce dependence on wild populations for cocoons necessitates assessment of genetic diversity in cultivated and wild populations. Molecular markers based on PCR of Inter-simple sequence repeats (ISSR) and simple sequence repeats (SSR) were used with four populations of wild insects and eleven populations of cultivated insects. Wild populations had high genetic diversity estimates (H(i) = 0.25; H(S) = 0.28; H(E) = 0.42) and at least one population contained private alleles. Both marker systems indicated that genetic variability within populations examined was significantly high. Among cultivated populations, insects of the Upper Assam region (H(i) = 0.19; H(S) = 0.18; H(E) = 0) were genetically distinct (F (ST) = 0.38 with both marker systems) from insects of Lower Assam (H(i) = 0.24; H(S) = 0.25; H(E) = 0.3). Sequencing of polymorphic amplicons suggested transposition as a mechanism for maintaining genomic diversity. Implications for conservation of native populations in the wild and preserving in-farm diversity are discussed. Public Library of Science 2012-11-21 /pmc/articles/PMC3503872/ /pubmed/23185503 http://dx.doi.org/10.1371/journal.pone.0049972 Text en © 2012 Singh et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Singh, Y. Tunginba
Mazumdar-Leighton, Sudeshna
Saikia, Mahaswetta
Pant, Prashant
Kashung, Sochanngam
Neog, Kartik
Chakravorty, Rajen
Nair, Suresh
Nagaraju, Javaregowda
Babu, Cheerukeri Raghavendra
Genetic Variation within Native Populations of Endemic Silkmoth Antheraea assamensis (Helfer) from Northeast India Indicates Need for In Situ Conservation
title Genetic Variation within Native Populations of Endemic Silkmoth Antheraea assamensis (Helfer) from Northeast India Indicates Need for In Situ Conservation
title_full Genetic Variation within Native Populations of Endemic Silkmoth Antheraea assamensis (Helfer) from Northeast India Indicates Need for In Situ Conservation
title_fullStr Genetic Variation within Native Populations of Endemic Silkmoth Antheraea assamensis (Helfer) from Northeast India Indicates Need for In Situ Conservation
title_full_unstemmed Genetic Variation within Native Populations of Endemic Silkmoth Antheraea assamensis (Helfer) from Northeast India Indicates Need for In Situ Conservation
title_short Genetic Variation within Native Populations of Endemic Silkmoth Antheraea assamensis (Helfer) from Northeast India Indicates Need for In Situ Conservation
title_sort genetic variation within native populations of endemic silkmoth antheraea assamensis (helfer) from northeast india indicates need for in situ conservation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3503872/
https://www.ncbi.nlm.nih.gov/pubmed/23185503
http://dx.doi.org/10.1371/journal.pone.0049972
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