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Tox-Database.net: a curated resource for data describing chemical triggered in vitro cardiac ion channels inhibition

BACKGROUND: Drugs safety issues are now recognized as being factors generating the most reasons for drug withdrawals at various levels of development and at the post-approval stage. Among them cardiotoxicity remains the main reason, despite the substantial effort put into in vitro and in vivo testin...

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Autores principales: Polak, Sebastian, Wiśniowska, Barbara, Glinka, Anna, Polak, Miłosz
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3506270/
https://www.ncbi.nlm.nih.gov/pubmed/22947121
http://dx.doi.org/10.1186/2050-6511-13-6
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author Polak, Sebastian
Wiśniowska, Barbara
Glinka, Anna
Polak, Miłosz
author_facet Polak, Sebastian
Wiśniowska, Barbara
Glinka, Anna
Polak, Miłosz
author_sort Polak, Sebastian
collection PubMed
description BACKGROUND: Drugs safety issues are now recognized as being factors generating the most reasons for drug withdrawals at various levels of development and at the post-approval stage. Among them cardiotoxicity remains the main reason, despite the substantial effort put into in vitro and in vivo testing, with the main focus put on hERG channel inhibition as the hypothesized surrogate of drug proarrhythmic potency. The large interest in the IKr current has resulted in the development of predictive tools and informative databases describing a drug's susceptibility to interactions with the hERG channel, although there are no similar, publicly available sets of data describing other ionic currents driven by the human cardiomyocyte ionic channels, which are recognized as an overlooked drug safety target. DISCUSSION: The aim of this database development and publication was to provide a scientifically useful, easily usable and clearly verifiable set of information describing not only IKr (hERG), but also other human cardiomyocyte specific ionic channels inhibition data (IKs, INa, ICa). SUMMARY: The broad range of data (chemical space and in vitro settings) and the easy to use user interface makes tox-database.net a useful tool for interested scientists. DATABASE URL: http://tox-database.net.
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spelling pubmed-35062702012-11-29 Tox-Database.net: a curated resource for data describing chemical triggered in vitro cardiac ion channels inhibition Polak, Sebastian Wiśniowska, Barbara Glinka, Anna Polak, Miłosz BMC Pharmacol Toxicol Database BACKGROUND: Drugs safety issues are now recognized as being factors generating the most reasons for drug withdrawals at various levels of development and at the post-approval stage. Among them cardiotoxicity remains the main reason, despite the substantial effort put into in vitro and in vivo testing, with the main focus put on hERG channel inhibition as the hypothesized surrogate of drug proarrhythmic potency. The large interest in the IKr current has resulted in the development of predictive tools and informative databases describing a drug's susceptibility to interactions with the hERG channel, although there are no similar, publicly available sets of data describing other ionic currents driven by the human cardiomyocyte ionic channels, which are recognized as an overlooked drug safety target. DISCUSSION: The aim of this database development and publication was to provide a scientifically useful, easily usable and clearly verifiable set of information describing not only IKr (hERG), but also other human cardiomyocyte specific ionic channels inhibition data (IKs, INa, ICa). SUMMARY: The broad range of data (chemical space and in vitro settings) and the easy to use user interface makes tox-database.net a useful tool for interested scientists. DATABASE URL: http://tox-database.net. BioMed Central 2012-08-13 /pmc/articles/PMC3506270/ /pubmed/22947121 http://dx.doi.org/10.1186/2050-6511-13-6 Text en Copyright ©2012 Polak et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Database
Polak, Sebastian
Wiśniowska, Barbara
Glinka, Anna
Polak, Miłosz
Tox-Database.net: a curated resource for data describing chemical triggered in vitro cardiac ion channels inhibition
title Tox-Database.net: a curated resource for data describing chemical triggered in vitro cardiac ion channels inhibition
title_full Tox-Database.net: a curated resource for data describing chemical triggered in vitro cardiac ion channels inhibition
title_fullStr Tox-Database.net: a curated resource for data describing chemical triggered in vitro cardiac ion channels inhibition
title_full_unstemmed Tox-Database.net: a curated resource for data describing chemical triggered in vitro cardiac ion channels inhibition
title_short Tox-Database.net: a curated resource for data describing chemical triggered in vitro cardiac ion channels inhibition
title_sort tox-database.net: a curated resource for data describing chemical triggered in vitro cardiac ion channels inhibition
topic Database
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3506270/
https://www.ncbi.nlm.nih.gov/pubmed/22947121
http://dx.doi.org/10.1186/2050-6511-13-6
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