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A robust dual reporter system to visualize and quantify gene expression mediated by transcription activator-like effectors

BACKGROUND: Transcription activator-like effectors (TALEs) are a class of naturally occurring transcription effectors that recognize specific DNA sequences and modulate gene expression. The modularity of TALEs DNA binding domain enables sequence-specific perturbation and offers broad applications in...

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Detalles Bibliográficos
Autores principales: Uhde-Stone, Claudia, Huang, Joseph, Lu, Biao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3509018/
https://www.ncbi.nlm.nih.gov/pubmed/22871120
http://dx.doi.org/10.1186/1480-9222-14-8
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author Uhde-Stone, Claudia
Huang, Joseph
Lu, Biao
author_facet Uhde-Stone, Claudia
Huang, Joseph
Lu, Biao
author_sort Uhde-Stone, Claudia
collection PubMed
description BACKGROUND: Transcription activator-like effectors (TALEs) are a class of naturally occurring transcription effectors that recognize specific DNA sequences and modulate gene expression. The modularity of TALEs DNA binding domain enables sequence-specific perturbation and offers broad applications in genetic and epigenetic studies. Although the efficient construction of TALEs has been established, robust functional tools to assess their functions remain lacking. RESULTS: We established a dual reporter system that was specifically designed for real-time monitoring and quantifying gene expression mediated by TALEs. We validated both sensitivity and specificity of this dual-reporter system in mammalian cells, and demonstrated that this dual reporter system is robust and potentially amenable to high throughput (HTP) applications. CONCLUSION: We have designed, constructed and validated a novel dual reporter system for assessing TALE mediated gene regulations. This system offers a robust and easy-to- use tool for real-time monitoring and quantifying gene expression in mammalian cells.
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spelling pubmed-35090182012-11-29 A robust dual reporter system to visualize and quantify gene expression mediated by transcription activator-like effectors Uhde-Stone, Claudia Huang, Joseph Lu, Biao Biol Proced Online Short Report BACKGROUND: Transcription activator-like effectors (TALEs) are a class of naturally occurring transcription effectors that recognize specific DNA sequences and modulate gene expression. The modularity of TALEs DNA binding domain enables sequence-specific perturbation and offers broad applications in genetic and epigenetic studies. Although the efficient construction of TALEs has been established, robust functional tools to assess their functions remain lacking. RESULTS: We established a dual reporter system that was specifically designed for real-time monitoring and quantifying gene expression mediated by TALEs. We validated both sensitivity and specificity of this dual-reporter system in mammalian cells, and demonstrated that this dual reporter system is robust and potentially amenable to high throughput (HTP) applications. CONCLUSION: We have designed, constructed and validated a novel dual reporter system for assessing TALE mediated gene regulations. This system offers a robust and easy-to- use tool for real-time monitoring and quantifying gene expression in mammalian cells. BioMed Central 2012-08-08 /pmc/articles/PMC3509018/ /pubmed/22871120 http://dx.doi.org/10.1186/1480-9222-14-8 Text en Copyright ©2012 Uhde-Stone et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Report
Uhde-Stone, Claudia
Huang, Joseph
Lu, Biao
A robust dual reporter system to visualize and quantify gene expression mediated by transcription activator-like effectors
title A robust dual reporter system to visualize and quantify gene expression mediated by transcription activator-like effectors
title_full A robust dual reporter system to visualize and quantify gene expression mediated by transcription activator-like effectors
title_fullStr A robust dual reporter system to visualize and quantify gene expression mediated by transcription activator-like effectors
title_full_unstemmed A robust dual reporter system to visualize and quantify gene expression mediated by transcription activator-like effectors
title_short A robust dual reporter system to visualize and quantify gene expression mediated by transcription activator-like effectors
title_sort robust dual reporter system to visualize and quantify gene expression mediated by transcription activator-like effectors
topic Short Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3509018/
https://www.ncbi.nlm.nih.gov/pubmed/22871120
http://dx.doi.org/10.1186/1480-9222-14-8
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