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A robust dual reporter system to visualize and quantify gene expression mediated by transcription activator-like effectors
BACKGROUND: Transcription activator-like effectors (TALEs) are a class of naturally occurring transcription effectors that recognize specific DNA sequences and modulate gene expression. The modularity of TALEs DNA binding domain enables sequence-specific perturbation and offers broad applications in...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3509018/ https://www.ncbi.nlm.nih.gov/pubmed/22871120 http://dx.doi.org/10.1186/1480-9222-14-8 |
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author | Uhde-Stone, Claudia Huang, Joseph Lu, Biao |
author_facet | Uhde-Stone, Claudia Huang, Joseph Lu, Biao |
author_sort | Uhde-Stone, Claudia |
collection | PubMed |
description | BACKGROUND: Transcription activator-like effectors (TALEs) are a class of naturally occurring transcription effectors that recognize specific DNA sequences and modulate gene expression. The modularity of TALEs DNA binding domain enables sequence-specific perturbation and offers broad applications in genetic and epigenetic studies. Although the efficient construction of TALEs has been established, robust functional tools to assess their functions remain lacking. RESULTS: We established a dual reporter system that was specifically designed for real-time monitoring and quantifying gene expression mediated by TALEs. We validated both sensitivity and specificity of this dual-reporter system in mammalian cells, and demonstrated that this dual reporter system is robust and potentially amenable to high throughput (HTP) applications. CONCLUSION: We have designed, constructed and validated a novel dual reporter system for assessing TALE mediated gene regulations. This system offers a robust and easy-to- use tool for real-time monitoring and quantifying gene expression in mammalian cells. |
format | Online Article Text |
id | pubmed-3509018 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-35090182012-11-29 A robust dual reporter system to visualize and quantify gene expression mediated by transcription activator-like effectors Uhde-Stone, Claudia Huang, Joseph Lu, Biao Biol Proced Online Short Report BACKGROUND: Transcription activator-like effectors (TALEs) are a class of naturally occurring transcription effectors that recognize specific DNA sequences and modulate gene expression. The modularity of TALEs DNA binding domain enables sequence-specific perturbation and offers broad applications in genetic and epigenetic studies. Although the efficient construction of TALEs has been established, robust functional tools to assess their functions remain lacking. RESULTS: We established a dual reporter system that was specifically designed for real-time monitoring and quantifying gene expression mediated by TALEs. We validated both sensitivity and specificity of this dual-reporter system in mammalian cells, and demonstrated that this dual reporter system is robust and potentially amenable to high throughput (HTP) applications. CONCLUSION: We have designed, constructed and validated a novel dual reporter system for assessing TALE mediated gene regulations. This system offers a robust and easy-to- use tool for real-time monitoring and quantifying gene expression in mammalian cells. BioMed Central 2012-08-08 /pmc/articles/PMC3509018/ /pubmed/22871120 http://dx.doi.org/10.1186/1480-9222-14-8 Text en Copyright ©2012 Uhde-Stone et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Report Uhde-Stone, Claudia Huang, Joseph Lu, Biao A robust dual reporter system to visualize and quantify gene expression mediated by transcription activator-like effectors |
title | A robust dual reporter system to visualize and quantify gene expression mediated by transcription activator-like effectors |
title_full | A robust dual reporter system to visualize and quantify gene expression mediated by transcription activator-like effectors |
title_fullStr | A robust dual reporter system to visualize and quantify gene expression mediated by transcription activator-like effectors |
title_full_unstemmed | A robust dual reporter system to visualize and quantify gene expression mediated by transcription activator-like effectors |
title_short | A robust dual reporter system to visualize and quantify gene expression mediated by transcription activator-like effectors |
title_sort | robust dual reporter system to visualize and quantify gene expression mediated by transcription activator-like effectors |
topic | Short Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3509018/ https://www.ncbi.nlm.nih.gov/pubmed/22871120 http://dx.doi.org/10.1186/1480-9222-14-8 |
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