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Nuclear Microsatellite Primers for the Endangered Relict Fir, Abies pinsapo (Pinaceae) and Cross-Amplification in Related Mediterranean Species

Twelve nuclear microsatellite primers (nSSR) were developed for the endangered species Abies pinsapo Boiss. to enable the study of gene flow and genetic structure in the remaining distribution areas. Microsatellite primers were developed using next-generation sequencing (454) data from a single Abie...

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Autores principales: Sánchez-Robles, Jose M., Balao, Francisco, García-Castaño, Juan L., Terrab, Anass, Navarro-Sampedro, Laura, Talavera, Salvador
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Molecular Diversity Preservation International (MDPI) 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3509577/
https://www.ncbi.nlm.nih.gov/pubmed/23203061
http://dx.doi.org/10.3390/ijms131114243
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author Sánchez-Robles, Jose M.
Balao, Francisco
García-Castaño, Juan L.
Terrab, Anass
Navarro-Sampedro, Laura
Talavera, Salvador
author_facet Sánchez-Robles, Jose M.
Balao, Francisco
García-Castaño, Juan L.
Terrab, Anass
Navarro-Sampedro, Laura
Talavera, Salvador
author_sort Sánchez-Robles, Jose M.
collection PubMed
description Twelve nuclear microsatellite primers (nSSR) were developed for the endangered species Abies pinsapo Boiss. to enable the study of gene flow and genetic structure in the remaining distribution areas. Microsatellite primers were developed using next-generation sequencing (454) data from a single Abies pinsapo individual. Primers were applied to thirty individuals from the three extant localities. The number of alleles per locus ranged from one to four. Cross-amplification was tested for other Abies species from the Mediterranean Basin, and most of the loci showed higher polymorphisms in the Mediterranean species than in A. pinsapo. These microsatellite markers provide tools for conservation genetic studies in Abies pinsapo as well other Abies species from the Mediterranean Basin.
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spelling pubmed-35095772013-01-09 Nuclear Microsatellite Primers for the Endangered Relict Fir, Abies pinsapo (Pinaceae) and Cross-Amplification in Related Mediterranean Species Sánchez-Robles, Jose M. Balao, Francisco García-Castaño, Juan L. Terrab, Anass Navarro-Sampedro, Laura Talavera, Salvador Int J Mol Sci Article Twelve nuclear microsatellite primers (nSSR) were developed for the endangered species Abies pinsapo Boiss. to enable the study of gene flow and genetic structure in the remaining distribution areas. Microsatellite primers were developed using next-generation sequencing (454) data from a single Abies pinsapo individual. Primers were applied to thirty individuals from the three extant localities. The number of alleles per locus ranged from one to four. Cross-amplification was tested for other Abies species from the Mediterranean Basin, and most of the loci showed higher polymorphisms in the Mediterranean species than in A. pinsapo. These microsatellite markers provide tools for conservation genetic studies in Abies pinsapo as well other Abies species from the Mediterranean Basin. Molecular Diversity Preservation International (MDPI) 2012-11-05 /pmc/articles/PMC3509577/ /pubmed/23203061 http://dx.doi.org/10.3390/ijms131114243 Text en © 2012 by the authors; licensee Molecular Diversity Preservation International, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0 This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0).
spellingShingle Article
Sánchez-Robles, Jose M.
Balao, Francisco
García-Castaño, Juan L.
Terrab, Anass
Navarro-Sampedro, Laura
Talavera, Salvador
Nuclear Microsatellite Primers for the Endangered Relict Fir, Abies pinsapo (Pinaceae) and Cross-Amplification in Related Mediterranean Species
title Nuclear Microsatellite Primers for the Endangered Relict Fir, Abies pinsapo (Pinaceae) and Cross-Amplification in Related Mediterranean Species
title_full Nuclear Microsatellite Primers for the Endangered Relict Fir, Abies pinsapo (Pinaceae) and Cross-Amplification in Related Mediterranean Species
title_fullStr Nuclear Microsatellite Primers for the Endangered Relict Fir, Abies pinsapo (Pinaceae) and Cross-Amplification in Related Mediterranean Species
title_full_unstemmed Nuclear Microsatellite Primers for the Endangered Relict Fir, Abies pinsapo (Pinaceae) and Cross-Amplification in Related Mediterranean Species
title_short Nuclear Microsatellite Primers for the Endangered Relict Fir, Abies pinsapo (Pinaceae) and Cross-Amplification in Related Mediterranean Species
title_sort nuclear microsatellite primers for the endangered relict fir, abies pinsapo (pinaceae) and cross-amplification in related mediterranean species
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3509577/
https://www.ncbi.nlm.nih.gov/pubmed/23203061
http://dx.doi.org/10.3390/ijms131114243
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