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Nuclear Microsatellite Primers for the Endangered Relict Fir, Abies pinsapo (Pinaceae) and Cross-Amplification in Related Mediterranean Species
Twelve nuclear microsatellite primers (nSSR) were developed for the endangered species Abies pinsapo Boiss. to enable the study of gene flow and genetic structure in the remaining distribution areas. Microsatellite primers were developed using next-generation sequencing (454) data from a single Abie...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Molecular Diversity Preservation International (MDPI)
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3509577/ https://www.ncbi.nlm.nih.gov/pubmed/23203061 http://dx.doi.org/10.3390/ijms131114243 |
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author | Sánchez-Robles, Jose M. Balao, Francisco García-Castaño, Juan L. Terrab, Anass Navarro-Sampedro, Laura Talavera, Salvador |
author_facet | Sánchez-Robles, Jose M. Balao, Francisco García-Castaño, Juan L. Terrab, Anass Navarro-Sampedro, Laura Talavera, Salvador |
author_sort | Sánchez-Robles, Jose M. |
collection | PubMed |
description | Twelve nuclear microsatellite primers (nSSR) were developed for the endangered species Abies pinsapo Boiss. to enable the study of gene flow and genetic structure in the remaining distribution areas. Microsatellite primers were developed using next-generation sequencing (454) data from a single Abies pinsapo individual. Primers were applied to thirty individuals from the three extant localities. The number of alleles per locus ranged from one to four. Cross-amplification was tested for other Abies species from the Mediterranean Basin, and most of the loci showed higher polymorphisms in the Mediterranean species than in A. pinsapo. These microsatellite markers provide tools for conservation genetic studies in Abies pinsapo as well other Abies species from the Mediterranean Basin. |
format | Online Article Text |
id | pubmed-3509577 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Molecular Diversity Preservation International (MDPI) |
record_format | MEDLINE/PubMed |
spelling | pubmed-35095772013-01-09 Nuclear Microsatellite Primers for the Endangered Relict Fir, Abies pinsapo (Pinaceae) and Cross-Amplification in Related Mediterranean Species Sánchez-Robles, Jose M. Balao, Francisco García-Castaño, Juan L. Terrab, Anass Navarro-Sampedro, Laura Talavera, Salvador Int J Mol Sci Article Twelve nuclear microsatellite primers (nSSR) were developed for the endangered species Abies pinsapo Boiss. to enable the study of gene flow and genetic structure in the remaining distribution areas. Microsatellite primers were developed using next-generation sequencing (454) data from a single Abies pinsapo individual. Primers were applied to thirty individuals from the three extant localities. The number of alleles per locus ranged from one to four. Cross-amplification was tested for other Abies species from the Mediterranean Basin, and most of the loci showed higher polymorphisms in the Mediterranean species than in A. pinsapo. These microsatellite markers provide tools for conservation genetic studies in Abies pinsapo as well other Abies species from the Mediterranean Basin. Molecular Diversity Preservation International (MDPI) 2012-11-05 /pmc/articles/PMC3509577/ /pubmed/23203061 http://dx.doi.org/10.3390/ijms131114243 Text en © 2012 by the authors; licensee Molecular Diversity Preservation International, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0 This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0). |
spellingShingle | Article Sánchez-Robles, Jose M. Balao, Francisco García-Castaño, Juan L. Terrab, Anass Navarro-Sampedro, Laura Talavera, Salvador Nuclear Microsatellite Primers for the Endangered Relict Fir, Abies pinsapo (Pinaceae) and Cross-Amplification in Related Mediterranean Species |
title | Nuclear Microsatellite Primers for the Endangered Relict Fir, Abies pinsapo (Pinaceae) and Cross-Amplification in Related Mediterranean Species |
title_full | Nuclear Microsatellite Primers for the Endangered Relict Fir, Abies pinsapo (Pinaceae) and Cross-Amplification in Related Mediterranean Species |
title_fullStr | Nuclear Microsatellite Primers for the Endangered Relict Fir, Abies pinsapo (Pinaceae) and Cross-Amplification in Related Mediterranean Species |
title_full_unstemmed | Nuclear Microsatellite Primers for the Endangered Relict Fir, Abies pinsapo (Pinaceae) and Cross-Amplification in Related Mediterranean Species |
title_short | Nuclear Microsatellite Primers for the Endangered Relict Fir, Abies pinsapo (Pinaceae) and Cross-Amplification in Related Mediterranean Species |
title_sort | nuclear microsatellite primers for the endangered relict fir, abies pinsapo (pinaceae) and cross-amplification in related mediterranean species |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3509577/ https://www.ncbi.nlm.nih.gov/pubmed/23203061 http://dx.doi.org/10.3390/ijms131114243 |
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