Cargando…

Homology Modeling and Molecular Dynamics Simulation Studies of a Marine Alkaline Protease

A cold-adapted marine alkaline protease (MP, accession no. ACY25898) was produced by a marine bacterium strain, which was isolated from Yellow Sea sediment in China. Many previous researches showed that this protease had potential application as a detergent additive. It was therefore crucial to dete...

Descripción completa

Detalles Bibliográficos
Autores principales:	Ji, Xiaofeng, Wang, Wei, Zheng, Yuan, Hao, Jianhua, Sun, Mi
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Libertas Academica 2012
Materias:	Original Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3511052/ https://www.ncbi.nlm.nih.gov/pubmed/23226008 http://dx.doi.org/10.4137/BBI.S10663

Ejemplares similares

Binding interactions of epididymal protease inhibitor and semenogelin-1: a homology modeling, docking and molecular dynamics simulation study
por: Shan, Changyu, et al.
Publicado: (2019)

Soft - sensing modeling based on ABC - MLSSVM inversion for marine low - temperature alkaline protease MP fermentation process
por: Wang, Bo, et al.
Publicado: (2020)

Atomic Resolution Homology Models and Molecular Dynamics Simulations of Plasmodium falciparum Tubulins
por: Hema, Kanipakam, et al.
Publicado: (2021)

Homology modeling, molecular docking, and molecular dynamics simulations elucidated α-fetoprotein binding modes
por: Shen, Jie, et al.
Publicado: (2013)

Production of alkaline protease from Cellulosimicrobium cellulans
por: Ferracini-Santos, Luciana, et al.
Publicado: (2009)

Structure Analysis of a New Psychrophilic Marine Protease
por: Zhang, Si-Cai, et al.
Publicado: (2011)

Dasatinib–SIK2 Binding Elucidated by Homology Modeling, Molecular Docking, and Dynamics Simulations
por: Shi, Mingsong, et al.
Publicado: (2021)

Identification of a New Marine Bacterial Strain SD8 and Optimization of Its Culture Conditions for Producing Alkaline Protease
por: Cui, Hongxia, et al.
Publicado: (2015)

Alkaline-Earth-Promoted CO Homologation and Reductive Catalysis
por: Anker, Mathew D, et al.
Publicado: (2015)

Molecular dynamics simulation of docking structures of SARS-CoV-2 main protease and HIV protease inhibitors
por: Cardoso, Wesley B., et al.
Publicado: (2021)

Prediction of the Human EP1 Receptor Binding Site by Homology Modeling and Molecular Dynamics Simulation
por: Zare, Behnoush, et al.
Publicado: (2011)

Expression and Characterization of Coprothermobacter proteolyticus Alkaline Serine Protease
por: Majeed, Tanveer, et al.
Publicado: (2013)

Microbial alkaline proteases: Optimization of production parameters and their properties
por: Sharma, Kanupriya Miglani, et al.
Publicado: (2017)

Fungal alkaline proteases and their potential applications in different industries
por: Pawar, Kadambari Subhash, et al.
Publicado: (2023)

Hydration of Heavy Alkaline-Earth Cations Studied by Molecular Dynamics Simulations and X-ray Absorption Spectroscopy
por: Pappalardo, Rafael R., et al.
Publicado: (2021)

A restraint molecular dynamics and simulated annealing approach for protein homology modeling utilizing mean angles
por: Möglich, Andreas, et al.
Publicado: (2005)

Improved prediction of HIV-1 protease-inhibitor binding energies by molecular dynamics simulations
por: Jenwitheesuk, Ekachai, et al.
Publicado: (2003)

Design of Supercapacitor Electrodes Using Molecular Dynamics Simulations
por: Bo, Zheng, et al.
Publicado: (2018)

Enhanced Thermostability of a Fungal Alkaline Protease by Different Additives
por: Nirmal, Nilesh P., et al.
Publicado: (2014)

Kinetics of alkaline protease production by Streptomyces griseoflavus PTCC1130
por: Hosseini, Seyed Vesal, et al.
Publicado: (2016)

Molecular Analysis of the Contribution of Alkaline Protease A and Elastase B to the Virulence of Pseudomonas aeruginosa Bloodstream Infections
por: Mateu-Borrás, Margalida, et al.
Publicado: (2022)

Novel recombinant keratin degrading subtilisin like serine alkaline protease from Bacillus cereus isolated from marine hydrothermal vent crabs
por: Gurunathan, Revathi, et al.
Publicado: (2021)

Drug binding dynamics of the dimeric SARS-CoV-2 main protease, determined by molecular dynamics simulation
por: Komatsu, Teruhisa S., et al.
Publicado: (2020)

Discovery of Novel Chinese Medicine Compounds Targeting 3CL Protease by Virtual Screening and Molecular Dynamics Simulation
por: Cheng, Jin, et al.
Publicado: (2023)

Effect of nelfinavir stereoisomers on coronavirus main protease: Molecular docking, molecular dynamics simulation and MM/GBSA study
por: Sargolzaei, Mohsen
Publicado: (2021)

Homology modeling and molecular docking simulation of martentoxin as a specific inhibitor of the BK channel
por: Yang, Chao, et al.
Publicado: (2022)

Molecular docking and dynamics simulation of main protease of SARS-CoV-2 with naproxen derivative
por: K Hussein, Rageh, et al.
Publicado: (2023)

Molecular Insights into Human Transmembrane Protease Serine-2 (TMPS2) Inhibitors against SARS-CoV2: Homology Modelling, Molecular Dynamics, and Docking Studies
por: Kishk, Safaa M., et al.
Publicado: (2020)

Multiscale Modeling of Structure, Transport and Reactivity in Alkaline Fuel Cell Membranes: Combined Coarse-Grained, Atomistic and Reactive Molecular Dynamics Simulations
por: Dong, Dengpan, et al.
Publicado: (2018)

Functional analysis and structure determination of alkaline protease from Aspergillus flavus
por: Syed, Rabbani, et al.
Publicado: (2012)

Enzymes for the laundry industries: tapping the vast metagenomic pool of alkaline proteases
por: Niehaus, F., et al.
Publicado: (2011)

Characterization of a chemostable serine alkaline protease from Periplaneta americana
por: Sanatan, Prashant T, et al.
Publicado: (2013)

Acceleration of Yeast Autolysis by Addition of Fatty Acids, Ethanol and Alkaline Protease
por: Takalloo, Zeinab, et al.
Publicado: (2022)

Insight into the Intermolecular Recognition Mechanism between Keap1 and IKKβ Combining Homology Modelling, Protein-Protein Docking, Molecular Dynamics Simulations and Virtual Alanine Mutation
por: Jiang, Zheng-Yu, et al.
Publicado: (2013)

Multiple Molecular Dynamics Simulations and Energy Analysis Unravel the Dynamic Properties and Binding Mechanism of Mutants HIV-1 Protease with DRV and CA-p2
por: Wang, Ruige, et al.
Publicado: (2022)

Molecular modeling of human alkaline sphingomyelinase
por: Suresh, Panneer Selvam, et al.
Publicado: (2011)

Correction: Homology modeling and molecular dynamics simulation study of beta carbonic anhydrase of Ascaris lumbricoides in Yadav and Khandelwal, 2019
por: Yadav, Mahima, et al.
Publicado: (2021)

Hunting the main protease of SARS-CoV-2 by plitidepsin: Molecular docking and temperature-dependent molecular dynamics simulations
por: Vishvakarma, Vijay Kumar, et al.
Publicado: (2021)

Aspergillus fumigatus Protease Alkaline Protease 1 (Alp1): A New Therapeutic Target for Fungal Asthma
por: Druey, Kirk M., et al.
Publicado: (2020)

Overexpression of Bacillus circulans alkaline protease in Bacillus subtilis and its potential application for recovery of protein from soybean dregs
por: Chen, Hao, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_kabaj9q78dqv659vnpu8j8kg1p