Cargando…

Automatic Detection and Quantification of Tree-in-Bud (TIB) Opacities from CT Scans

This study presents a novel computer-assisted detection (CAD) system for automatically detecting and precisely quantifying abnormal nodular branching opacities in chest computed tomography (CT), termed tree-in-bud (TIB) opacities by radiology literature. The developed CAD system in this study is bas...

Descripción completa

Detalles Bibliográficos
Autores principales: Bagci, Ulas, Yao, Jianhua, Wu, Albert, Caban, Jesus, Palmore, Tara N., Suffredini, Anthony F., Aras, Omer, Mollura, Daniel J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: IEEE 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3511590/
https://www.ncbi.nlm.nih.gov/pubmed/22434795
http://dx.doi.org/10.1109/TBME.2012.2190984
_version_ 1782251643611381760
author Bagci, Ulas
Yao, Jianhua
Wu, Albert
Caban, Jesus
Palmore, Tara N.
Suffredini, Anthony F.
Aras, Omer
Mollura, Daniel J.
author_facet Bagci, Ulas
Yao, Jianhua
Wu, Albert
Caban, Jesus
Palmore, Tara N.
Suffredini, Anthony F.
Aras, Omer
Mollura, Daniel J.
author_sort Bagci, Ulas
collection PubMed
description This study presents a novel computer-assisted detection (CAD) system for automatically detecting and precisely quantifying abnormal nodular branching opacities in chest computed tomography (CT), termed tree-in-bud (TIB) opacities by radiology literature. The developed CAD system in this study is based on 1) fast localization of candidate imaging patterns using local scale information of the images, and 2) Möbius invariant feature extraction method based on learned local shape and texture properties of TIB patterns. For fast localization of candidate imaging patterns, we use ball-scale filtering and, based on the observation of the pattern of interest, a suitable scale selection is used to retain only small size patterns. Once candidate abnormality patterns are identified, we extract proposed shape features from regions where at least one candidate pattern occupies. The comparative evaluation of the proposed method with commonly used CAD methods is presented with a dataset of 60 chest CTs (laboratory confirmed 39 viral bronchiolitis human parainfluenza CTs and 21 normal chest CTs). The quantitative results are presented as the area under the receiver operator characteristics curves and a computer score (volume affected by TIB) provided as an output of the CAD system. In addition, a visual grading scheme is applied to the patient data by three well-trained radiologists. Interobserver and observer–computer agreements are obtained by the relevant statistical methods over different lung zones. Experimental results demonstrate that the proposed CAD system can achieve high detection rates with an overall accuracy of 90.96%. Moreover, correlations of observer–observer [Formula: see text] , [Formula: see text] and observer–CAD agreements [Formula: see text] , [Formula: see text] validate the feasibility of the use of the proposed CAD system in detecting and quantifying TIB patterns.
format Online
Article
Text
id pubmed-3511590
institution National Center for Biotechnology Information
language English
publishDate 2012
publisher IEEE
record_format MEDLINE/PubMed
spelling pubmed-35115902012-12-01 Automatic Detection and Quantification of Tree-in-Bud (TIB) Opacities from CT Scans Bagci, Ulas Yao, Jianhua Wu, Albert Caban, Jesus Palmore, Tara N. Suffredini, Anthony F. Aras, Omer Mollura, Daniel J. IEEE Trans Biomed Eng Regular Papers This study presents a novel computer-assisted detection (CAD) system for automatically detecting and precisely quantifying abnormal nodular branching opacities in chest computed tomography (CT), termed tree-in-bud (TIB) opacities by radiology literature. The developed CAD system in this study is based on 1) fast localization of candidate imaging patterns using local scale information of the images, and 2) Möbius invariant feature extraction method based on learned local shape and texture properties of TIB patterns. For fast localization of candidate imaging patterns, we use ball-scale filtering and, based on the observation of the pattern of interest, a suitable scale selection is used to retain only small size patterns. Once candidate abnormality patterns are identified, we extract proposed shape features from regions where at least one candidate pattern occupies. The comparative evaluation of the proposed method with commonly used CAD methods is presented with a dataset of 60 chest CTs (laboratory confirmed 39 viral bronchiolitis human parainfluenza CTs and 21 normal chest CTs). The quantitative results are presented as the area under the receiver operator characteristics curves and a computer score (volume affected by TIB) provided as an output of the CAD system. In addition, a visual grading scheme is applied to the patient data by three well-trained radiologists. Interobserver and observer–computer agreements are obtained by the relevant statistical methods over different lung zones. Experimental results demonstrate that the proposed CAD system can achieve high detection rates with an overall accuracy of 90.96%. Moreover, correlations of observer–observer [Formula: see text] , [Formula: see text] and observer–CAD agreements [Formula: see text] , [Formula: see text] validate the feasibility of the use of the proposed CAD system in detecting and quantifying TIB patterns. IEEE 2012-03-14 /pmc/articles/PMC3511590/ /pubmed/22434795 http://dx.doi.org/10.1109/TBME.2012.2190984 Text en https://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 License. For more information, see https://creativecommons.org/licenses/by/4.0/
spellingShingle Regular Papers
Bagci, Ulas
Yao, Jianhua
Wu, Albert
Caban, Jesus
Palmore, Tara N.
Suffredini, Anthony F.
Aras, Omer
Mollura, Daniel J.
Automatic Detection and Quantification of Tree-in-Bud (TIB) Opacities from CT Scans
title Automatic Detection and Quantification of Tree-in-Bud (TIB) Opacities from CT Scans
title_full Automatic Detection and Quantification of Tree-in-Bud (TIB) Opacities from CT Scans
title_fullStr Automatic Detection and Quantification of Tree-in-Bud (TIB) Opacities from CT Scans
title_full_unstemmed Automatic Detection and Quantification of Tree-in-Bud (TIB) Opacities from CT Scans
title_short Automatic Detection and Quantification of Tree-in-Bud (TIB) Opacities from CT Scans
title_sort automatic detection and quantification of tree-in-bud (tib) opacities from ct scans
topic Regular Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3511590/
https://www.ncbi.nlm.nih.gov/pubmed/22434795
http://dx.doi.org/10.1109/TBME.2012.2190984
work_keys_str_mv AT bagciulas automaticdetectionandquantificationoftreeinbudtibopacitiesfromctscans
AT yaojianhua automaticdetectionandquantificationoftreeinbudtibopacitiesfromctscans
AT wualbert automaticdetectionandquantificationoftreeinbudtibopacitiesfromctscans
AT cabanjesus automaticdetectionandquantificationoftreeinbudtibopacitiesfromctscans
AT palmoretaran automaticdetectionandquantificationoftreeinbudtibopacitiesfromctscans
AT suffredinianthonyf automaticdetectionandquantificationoftreeinbudtibopacitiesfromctscans
AT arasomer automaticdetectionandquantificationoftreeinbudtibopacitiesfromctscans
AT molluradanielj automaticdetectionandquantificationoftreeinbudtibopacitiesfromctscans