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286 Association Analysis of Member RAS Oncogene Family Gene Polymorphisms with Aspirin Intolerance in Asthmatic Patients
BACKGROUND: Member RAS oncogene family (RAB1A) converts small G protein to rab1 protein, a inflammation of blood eosinophils. Thus, functional alterations of the RAB1A gene may contribute to Aspirin exacerbated respiratory disease (AERD). METHODS: Asthmatics (n = 1277) were categorized into Aspirin...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
World Allergy Organization Journal
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3512717/ http://dx.doi.org/10.1097/01.WOX.0000412043.44328.fa |
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author | Kim, Myung ok Park, Choon-Sik Kim, Tae-Hoon |
author_facet | Kim, Myung ok Park, Choon-Sik Kim, Tae-Hoon |
author_sort | Kim, Myung ok |
collection | PubMed |
description | BACKGROUND: Member RAS oncogene family (RAB1A) converts small G protein to rab1 protein, a inflammation of blood eosinophils. Thus, functional alterations of the RAB1A gene may contribute to Aspirin exacerbated respiratory disease (AERD). METHODS: Asthmatics (n = 1277) were categorized into Aspirin exacerbated respiratory disease (AERD) and aspirin-tolerant asthma (ATA). 8 SNPs were genotyped. Messenger RNA expression of the RAB1A gene by peripheral blood mononuclear cell is measured by Real time PCR and reverse transcriptase polymerase chain reaction (RT-PCR). Human PBMC culture supernatant expression of 11-dehydrothromboxane B2. Protein expression of the RAB1A gene by PBMC is measured by RNAi (Knock down) analysis. RESULTS: The logistic regression analysis showed that the rare allele frequency of +41170 C>G on intron 5 was significantly lower in the AERD group (n = 261) than in the ATA group (n = 1016) (P = 0.002). The linear regression analysis revealed a strong association of +41170 C>G with the aspirin challenge induced-FEV(1) fall (P = 0.00008). RT-PCR and real time PCR revealed an exon-4-deleted variants. The level of full-length RAB1A mRNA did not differ, but the variants was significantly higher in +41170 G homozygotes than in +41170 C homozygotes (P = 0.002). Intron based PCR was was used to amplify transcripts of PBMC pre-mRNA in which intron-5 had been removed (mRNA) while another set of primers was used to amplify intron 5-containing pre-transcripts (pre-mRNA). Knock down analysis of RAB1A Transcripts level in hPBMC. Thromboxane B(2) were increased in the siRNA treated when compared those of scramble and control. After knock down analysis, the levels of thromboxane B(2) were significantly decreased in PBMC culture supernatant. CONCLUSIONS: The rare allele of +41170 C>G may play a protective role against aspirin hypersensitivity via a lower catalytic activity of the RAB1A gene attributed to the increase of a non-functioning variants of RAB1A. |
format | Online Article Text |
id | pubmed-3512717 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | World Allergy Organization Journal |
record_format | MEDLINE/PubMed |
spelling | pubmed-35127172012-12-21 286 Association Analysis of Member RAS Oncogene Family Gene Polymorphisms with Aspirin Intolerance in Asthmatic Patients Kim, Myung ok Park, Choon-Sik Kim, Tae-Hoon World Allergy Organ J Abstracts of the XXII World Allergy Congress BACKGROUND: Member RAS oncogene family (RAB1A) converts small G protein to rab1 protein, a inflammation of blood eosinophils. Thus, functional alterations of the RAB1A gene may contribute to Aspirin exacerbated respiratory disease (AERD). METHODS: Asthmatics (n = 1277) were categorized into Aspirin exacerbated respiratory disease (AERD) and aspirin-tolerant asthma (ATA). 8 SNPs were genotyped. Messenger RNA expression of the RAB1A gene by peripheral blood mononuclear cell is measured by Real time PCR and reverse transcriptase polymerase chain reaction (RT-PCR). Human PBMC culture supernatant expression of 11-dehydrothromboxane B2. Protein expression of the RAB1A gene by PBMC is measured by RNAi (Knock down) analysis. RESULTS: The logistic regression analysis showed that the rare allele frequency of +41170 C>G on intron 5 was significantly lower in the AERD group (n = 261) than in the ATA group (n = 1016) (P = 0.002). The linear regression analysis revealed a strong association of +41170 C>G with the aspirin challenge induced-FEV(1) fall (P = 0.00008). RT-PCR and real time PCR revealed an exon-4-deleted variants. The level of full-length RAB1A mRNA did not differ, but the variants was significantly higher in +41170 G homozygotes than in +41170 C homozygotes (P = 0.002). Intron based PCR was was used to amplify transcripts of PBMC pre-mRNA in which intron-5 had been removed (mRNA) while another set of primers was used to amplify intron 5-containing pre-transcripts (pre-mRNA). Knock down analysis of RAB1A Transcripts level in hPBMC. Thromboxane B(2) were increased in the siRNA treated when compared those of scramble and control. After knock down analysis, the levels of thromboxane B(2) were significantly decreased in PBMC culture supernatant. CONCLUSIONS: The rare allele of +41170 C>G may play a protective role against aspirin hypersensitivity via a lower catalytic activity of the RAB1A gene attributed to the increase of a non-functioning variants of RAB1A. World Allergy Organization Journal 2012-02-17 /pmc/articles/PMC3512717/ http://dx.doi.org/10.1097/01.WOX.0000412043.44328.fa Text en Copyright © 2012 by World Allergy Organization |
spellingShingle | Abstracts of the XXII World Allergy Congress Kim, Myung ok Park, Choon-Sik Kim, Tae-Hoon 286 Association Analysis of Member RAS Oncogene Family Gene Polymorphisms with Aspirin Intolerance in Asthmatic Patients |
title | 286 Association Analysis of Member RAS Oncogene Family Gene Polymorphisms with Aspirin Intolerance in Asthmatic Patients |
title_full | 286 Association Analysis of Member RAS Oncogene Family Gene Polymorphisms with Aspirin Intolerance in Asthmatic Patients |
title_fullStr | 286 Association Analysis of Member RAS Oncogene Family Gene Polymorphisms with Aspirin Intolerance in Asthmatic Patients |
title_full_unstemmed | 286 Association Analysis of Member RAS Oncogene Family Gene Polymorphisms with Aspirin Intolerance in Asthmatic Patients |
title_short | 286 Association Analysis of Member RAS Oncogene Family Gene Polymorphisms with Aspirin Intolerance in Asthmatic Patients |
title_sort | 286 association analysis of member ras oncogene family gene polymorphisms with aspirin intolerance in asthmatic patients |
topic | Abstracts of the XXII World Allergy Congress |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3512717/ http://dx.doi.org/10.1097/01.WOX.0000412043.44328.fa |
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