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Fast and accurate low-dimensional reduction of biophysically detailed neuron models

Realistic modeling of neurons are quite successful in complementing traditional experimental techniques. However, their networks require a computational power beyond the capabilities of current supercomputers, and the methods used so far to reduce their complexity do not take into account the key fe...

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Detalles Bibliográficos
Autores principales: Marasco, Addolorata, Limongiello, Alessandro, Migliore, Michele
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3514644/
https://www.ncbi.nlm.nih.gov/pubmed/23226594
http://dx.doi.org/10.1038/srep00928
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author Marasco, Addolorata
Limongiello, Alessandro
Migliore, Michele
author_facet Marasco, Addolorata
Limongiello, Alessandro
Migliore, Michele
author_sort Marasco, Addolorata
collection PubMed
description Realistic modeling of neurons are quite successful in complementing traditional experimental techniques. However, their networks require a computational power beyond the capabilities of current supercomputers, and the methods used so far to reduce their complexity do not take into account the key features of the cells nor critical physiological properties. Here we introduce a new, automatic and fast method to map realistic neurons into equivalent reduced models running up to > 40 times faster while maintaining a very high accuracy of the membrane potential dynamics during synaptic inputs, and a direct link with experimental observables. The mapping of arbitrary sets of synaptic inputs, without additional fine tuning, would also allow the convenient and efficient implementation of a new generation of large-scale simulations of brain regions reproducing the biological variability observed in real neurons, with unprecedented advances to understand higher brain functions.
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spelling pubmed-35146442012-12-05 Fast and accurate low-dimensional reduction of biophysically detailed neuron models Marasco, Addolorata Limongiello, Alessandro Migliore, Michele Sci Rep Article Realistic modeling of neurons are quite successful in complementing traditional experimental techniques. However, their networks require a computational power beyond the capabilities of current supercomputers, and the methods used so far to reduce their complexity do not take into account the key features of the cells nor critical physiological properties. Here we introduce a new, automatic and fast method to map realistic neurons into equivalent reduced models running up to > 40 times faster while maintaining a very high accuracy of the membrane potential dynamics during synaptic inputs, and a direct link with experimental observables. The mapping of arbitrary sets of synaptic inputs, without additional fine tuning, would also allow the convenient and efficient implementation of a new generation of large-scale simulations of brain regions reproducing the biological variability observed in real neurons, with unprecedented advances to understand higher brain functions. Nature Publishing Group 2012-12-05 /pmc/articles/PMC3514644/ /pubmed/23226594 http://dx.doi.org/10.1038/srep00928 Text en Copyright © 2012, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-sa/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-ShareALike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/
spellingShingle Article
Marasco, Addolorata
Limongiello, Alessandro
Migliore, Michele
Fast and accurate low-dimensional reduction of biophysically detailed neuron models
title Fast and accurate low-dimensional reduction of biophysically detailed neuron models
title_full Fast and accurate low-dimensional reduction of biophysically detailed neuron models
title_fullStr Fast and accurate low-dimensional reduction of biophysically detailed neuron models
title_full_unstemmed Fast and accurate low-dimensional reduction of biophysically detailed neuron models
title_short Fast and accurate low-dimensional reduction of biophysically detailed neuron models
title_sort fast and accurate low-dimensional reduction of biophysically detailed neuron models
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3514644/
https://www.ncbi.nlm.nih.gov/pubmed/23226594
http://dx.doi.org/10.1038/srep00928
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