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Association Analysis between SNPs in IL-28B Gene and the Progress of Hepatitis B Infection in Han Chinese
OBJECTIVE: As a candidate gene association study, we investigated the genetic association of SNPs in IL-28B genes with different outcomes of HBV infection, including LC and HCC occurrence. METHODS: Chinese Han subjects were categorized into two groups: 406 LC caused by CHB and 406 HCC caused by CHB....
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3515436/ https://www.ncbi.nlm.nih.gov/pubmed/23227209 http://dx.doi.org/10.1371/journal.pone.0050787 |
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author | Chen, Jie Wang, Lanlan Li, Yi Cai, Bei Fu, Yang Liao, Yun Zhang, Junlong |
author_facet | Chen, Jie Wang, Lanlan Li, Yi Cai, Bei Fu, Yang Liao, Yun Zhang, Junlong |
author_sort | Chen, Jie |
collection | PubMed |
description | OBJECTIVE: As a candidate gene association study, we investigated the genetic association of SNPs in IL-28B genes with different outcomes of HBV infection, including LC and HCC occurrence. METHODS: Chinese Han subjects were categorized into two groups: 406 LC caused by CHB and 406 HCC caused by CHB. Genomic DNA was isolated from whole blood samples, SNPs were detected using high resolution melting curve (HRM) method. PCR amplification was carried out under the same conditions in a 96-well plate in Real-Time PCR System. Then 341 LC and 356 HCC patients caused by HBV infection were analyzed as a verification by independent sample. 393 CHB patients and 244 health subjects were included as control. RESULTS: CHB patients who progress to LC or HCC showed a significant different frequency in rs12979860 (p = 0.046). Patients with HCC carried more frequently the T alleles in rs12979860 comparison to LC. Same results were found in the independent sample. CONCLUSION: IL-28B rs12979860 C/T polymorphism T allele appears to be more prevalent in patients with HCC than in LC. Carriage of this allele seems to enhance the risk for developing HCC. Gene polymorphism of IL-28B may confer symptomatic specificity in progress and extent of hepatitis B infection. |
format | Online Article Text |
id | pubmed-3515436 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-35154362012-12-07 Association Analysis between SNPs in IL-28B Gene and the Progress of Hepatitis B Infection in Han Chinese Chen, Jie Wang, Lanlan Li, Yi Cai, Bei Fu, Yang Liao, Yun Zhang, Junlong PLoS One Research Article OBJECTIVE: As a candidate gene association study, we investigated the genetic association of SNPs in IL-28B genes with different outcomes of HBV infection, including LC and HCC occurrence. METHODS: Chinese Han subjects were categorized into two groups: 406 LC caused by CHB and 406 HCC caused by CHB. Genomic DNA was isolated from whole blood samples, SNPs were detected using high resolution melting curve (HRM) method. PCR amplification was carried out under the same conditions in a 96-well plate in Real-Time PCR System. Then 341 LC and 356 HCC patients caused by HBV infection were analyzed as a verification by independent sample. 393 CHB patients and 244 health subjects were included as control. RESULTS: CHB patients who progress to LC or HCC showed a significant different frequency in rs12979860 (p = 0.046). Patients with HCC carried more frequently the T alleles in rs12979860 comparison to LC. Same results were found in the independent sample. CONCLUSION: IL-28B rs12979860 C/T polymorphism T allele appears to be more prevalent in patients with HCC than in LC. Carriage of this allele seems to enhance the risk for developing HCC. Gene polymorphism of IL-28B may confer symptomatic specificity in progress and extent of hepatitis B infection. Public Library of Science 2012-12-05 /pmc/articles/PMC3515436/ /pubmed/23227209 http://dx.doi.org/10.1371/journal.pone.0050787 Text en © 2012 Chen et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Chen, Jie Wang, Lanlan Li, Yi Cai, Bei Fu, Yang Liao, Yun Zhang, Junlong Association Analysis between SNPs in IL-28B Gene and the Progress of Hepatitis B Infection in Han Chinese |
title | Association Analysis between SNPs in IL-28B Gene and the Progress of Hepatitis B Infection in Han Chinese |
title_full | Association Analysis between SNPs in IL-28B Gene and the Progress of Hepatitis B Infection in Han Chinese |
title_fullStr | Association Analysis between SNPs in IL-28B Gene and the Progress of Hepatitis B Infection in Han Chinese |
title_full_unstemmed | Association Analysis between SNPs in IL-28B Gene and the Progress of Hepatitis B Infection in Han Chinese |
title_short | Association Analysis between SNPs in IL-28B Gene and the Progress of Hepatitis B Infection in Han Chinese |
title_sort | association analysis between snps in il-28b gene and the progress of hepatitis b infection in han chinese |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3515436/ https://www.ncbi.nlm.nih.gov/pubmed/23227209 http://dx.doi.org/10.1371/journal.pone.0050787 |
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