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Integrating next-generation sequencing and traditional tongue diagnosis to determine tongue coating microbiome
Tongue diagnosis is a unique method in traditional Chinese medicine (TCM). This is the first investigation on the association between traditional tongue diagnosis and the tongue coating microbiome using next-generation sequencing. The study included 19 gastritis patients with a typical white-greasy...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3515809/ https://www.ncbi.nlm.nih.gov/pubmed/23226834 http://dx.doi.org/10.1038/srep00936 |
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author | Jiang, Bai Liang, Xujun Chen, Yang Ma, Tao Liu, Liyang Li, Junfeng Jiang, Rui Chen, Ting Zhang, Xuegong Li, Shao |
author_facet | Jiang, Bai Liang, Xujun Chen, Yang Ma, Tao Liu, Liyang Li, Junfeng Jiang, Rui Chen, Ting Zhang, Xuegong Li, Shao |
author_sort | Jiang, Bai |
collection | PubMed |
description | Tongue diagnosis is a unique method in traditional Chinese medicine (TCM). This is the first investigation on the association between traditional tongue diagnosis and the tongue coating microbiome using next-generation sequencing. The study included 19 gastritis patients with a typical white-greasy or yellow-dense tongue coating corresponding to TCM Cold or Hot Syndrome respectively, as well as eight healthy volunteers. An Illumina paired-end, double-barcode 16S rRNA sequencing protocol was designed to profile the tongue-coating microbiome, from which approximately 3.7 million V6 tags for each sample were obtained. We identified 123 and 258 species-level OTUs that were enriched in patients with Cold/Hot Syndromes, respectively, representing "Cold Microbiota" and "Hot Microbiota". We further constructed the tongue microbiota-imbalanced networks associated with Cold/Hot Syndromes. The results reveal an important connection between the tongue-coating microbiome and traditional tongue diagnosis, and illustrate the potential of the tongue-coating microbiome as a novel holistic biomarker for characterizing patient subtypes. |
format | Online Article Text |
id | pubmed-3515809 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-35158092012-12-06 Integrating next-generation sequencing and traditional tongue diagnosis to determine tongue coating microbiome Jiang, Bai Liang, Xujun Chen, Yang Ma, Tao Liu, Liyang Li, Junfeng Jiang, Rui Chen, Ting Zhang, Xuegong Li, Shao Sci Rep Article Tongue diagnosis is a unique method in traditional Chinese medicine (TCM). This is the first investigation on the association between traditional tongue diagnosis and the tongue coating microbiome using next-generation sequencing. The study included 19 gastritis patients with a typical white-greasy or yellow-dense tongue coating corresponding to TCM Cold or Hot Syndrome respectively, as well as eight healthy volunteers. An Illumina paired-end, double-barcode 16S rRNA sequencing protocol was designed to profile the tongue-coating microbiome, from which approximately 3.7 million V6 tags for each sample were obtained. We identified 123 and 258 species-level OTUs that were enriched in patients with Cold/Hot Syndromes, respectively, representing "Cold Microbiota" and "Hot Microbiota". We further constructed the tongue microbiota-imbalanced networks associated with Cold/Hot Syndromes. The results reveal an important connection between the tongue-coating microbiome and traditional tongue diagnosis, and illustrate the potential of the tongue-coating microbiome as a novel holistic biomarker for characterizing patient subtypes. Nature Publishing Group 2012-12-06 /pmc/articles/PMC3515809/ /pubmed/23226834 http://dx.doi.org/10.1038/srep00936 Text en Copyright © 2012, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-nd/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/ |
spellingShingle | Article Jiang, Bai Liang, Xujun Chen, Yang Ma, Tao Liu, Liyang Li, Junfeng Jiang, Rui Chen, Ting Zhang, Xuegong Li, Shao Integrating next-generation sequencing and traditional tongue diagnosis to determine tongue coating microbiome |
title | Integrating next-generation sequencing and traditional tongue diagnosis to determine tongue coating microbiome |
title_full | Integrating next-generation sequencing and traditional tongue diagnosis to determine tongue coating microbiome |
title_fullStr | Integrating next-generation sequencing and traditional tongue diagnosis to determine tongue coating microbiome |
title_full_unstemmed | Integrating next-generation sequencing and traditional tongue diagnosis to determine tongue coating microbiome |
title_short | Integrating next-generation sequencing and traditional tongue diagnosis to determine tongue coating microbiome |
title_sort | integrating next-generation sequencing and traditional tongue diagnosis to determine tongue coating microbiome |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3515809/ https://www.ncbi.nlm.nih.gov/pubmed/23226834 http://dx.doi.org/10.1038/srep00936 |
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