Cargando…

Variation in Dicer Gene Is Associated with Increased Survival in T-Cell Lymphoma

Dicer, an endonuclease in RNase III family, is essential for the RNA interference (RNAi) pathway. Aberrant expression of Dicer has been shown in various cancers including some subtypes of T cell lymphoma (TCL), which influences patient prognosis. A single-nucleotide polymorphism (SNP) rs3742330A>...

Descripción completa

Detalles Bibliográficos
Autores principales: Li, Xi, Tian, Xiaobo, Zhang, Bo, Zhang, Yanqi, Chen, Jieping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3518478/
https://www.ncbi.nlm.nih.gov/pubmed/23251602
http://dx.doi.org/10.1371/journal.pone.0051640
_version_ 1782252561501257728
author Li, Xi
Tian, Xiaobo
Zhang, Bo
Zhang, Yanqi
Chen, Jieping
author_facet Li, Xi
Tian, Xiaobo
Zhang, Bo
Zhang, Yanqi
Chen, Jieping
author_sort Li, Xi
collection PubMed
description Dicer, an endonuclease in RNase III family, is essential for the RNA interference (RNAi) pathway. Aberrant expression of Dicer has been shown in various cancers including some subtypes of T cell lymphoma (TCL), which influences patient prognosis. A single-nucleotide polymorphism (SNP) rs3742330A>G has been identified in the Dicer gene, located in the 3′ untranslated region (3′ UTR) that is important for mRNA transcript stability. We investigated whether rs3742330 is associated with the survival in 163 TCL patients. Significant association between Dicer rs3742330 and TCL survival were found. Patients carrying the GG genotype (n = 12) had a significantly increased overall survival (OS) compared with those carrying the GA and AA genotypes (n = 70 and n = 81, respectively; p = 0.031). Moreover, the significant association was maintained for patients with mature T type (n = 134; p = 0.026). In multivariate Cox-regression analysis, rs3742330 proved to be an independent predictor for OS, together with the commonly used International Prognostic Index (IPI) and BAFF rs9514828, another SNP we have previously reported to be associated with TCL survival, with hazard ratios (HRs) for patient death rate of 8.956 (95% CI, 1.210 to 66.318; p = 0.032) for the GA genotype and 10.145 (95% CI, 1.371 to 75.084; p = 0.023) for the AA genotype. Furthermore, we observed cumulative effects of Dicer rs3742330 and BAFF rs9514828 on TCL survival. Compared with patients carrying zero unfavorable genotype, those carrying one and two unfavorable genotypes had an increased risk of death with a HR of 7.104 (95% CI, 0.969–53.086; p = 0.054) and 14.932 (95% CI, 1.950–114.354; p = 0.009), respectively, with a significant dose-response trend (p(trend)  = 0.004). In conclusion, Dicer rs3742330 is associated with TCL survival, suggesting that genetic variation might play a role in predicting prognosis of TCL patients.
format Online
Article
Text
id pubmed-3518478
institution National Center for Biotechnology Information
language English
publishDate 2012
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-35184782012-12-18 Variation in Dicer Gene Is Associated with Increased Survival in T-Cell Lymphoma Li, Xi Tian, Xiaobo Zhang, Bo Zhang, Yanqi Chen, Jieping PLoS One Research Article Dicer, an endonuclease in RNase III family, is essential for the RNA interference (RNAi) pathway. Aberrant expression of Dicer has been shown in various cancers including some subtypes of T cell lymphoma (TCL), which influences patient prognosis. A single-nucleotide polymorphism (SNP) rs3742330A>G has been identified in the Dicer gene, located in the 3′ untranslated region (3′ UTR) that is important for mRNA transcript stability. We investigated whether rs3742330 is associated with the survival in 163 TCL patients. Significant association between Dicer rs3742330 and TCL survival were found. Patients carrying the GG genotype (n = 12) had a significantly increased overall survival (OS) compared with those carrying the GA and AA genotypes (n = 70 and n = 81, respectively; p = 0.031). Moreover, the significant association was maintained for patients with mature T type (n = 134; p = 0.026). In multivariate Cox-regression analysis, rs3742330 proved to be an independent predictor for OS, together with the commonly used International Prognostic Index (IPI) and BAFF rs9514828, another SNP we have previously reported to be associated with TCL survival, with hazard ratios (HRs) for patient death rate of 8.956 (95% CI, 1.210 to 66.318; p = 0.032) for the GA genotype and 10.145 (95% CI, 1.371 to 75.084; p = 0.023) for the AA genotype. Furthermore, we observed cumulative effects of Dicer rs3742330 and BAFF rs9514828 on TCL survival. Compared with patients carrying zero unfavorable genotype, those carrying one and two unfavorable genotypes had an increased risk of death with a HR of 7.104 (95% CI, 0.969–53.086; p = 0.054) and 14.932 (95% CI, 1.950–114.354; p = 0.009), respectively, with a significant dose-response trend (p(trend)  = 0.004). In conclusion, Dicer rs3742330 is associated with TCL survival, suggesting that genetic variation might play a role in predicting prognosis of TCL patients. Public Library of Science 2012-12-10 /pmc/articles/PMC3518478/ /pubmed/23251602 http://dx.doi.org/10.1371/journal.pone.0051640 Text en © 2012 Li et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Li, Xi
Tian, Xiaobo
Zhang, Bo
Zhang, Yanqi
Chen, Jieping
Variation in Dicer Gene Is Associated with Increased Survival in T-Cell Lymphoma
title Variation in Dicer Gene Is Associated with Increased Survival in T-Cell Lymphoma
title_full Variation in Dicer Gene Is Associated with Increased Survival in T-Cell Lymphoma
title_fullStr Variation in Dicer Gene Is Associated with Increased Survival in T-Cell Lymphoma
title_full_unstemmed Variation in Dicer Gene Is Associated with Increased Survival in T-Cell Lymphoma
title_short Variation in Dicer Gene Is Associated with Increased Survival in T-Cell Lymphoma
title_sort variation in dicer gene is associated with increased survival in t-cell lymphoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3518478/
https://www.ncbi.nlm.nih.gov/pubmed/23251602
http://dx.doi.org/10.1371/journal.pone.0051640
work_keys_str_mv AT lixi variationindicergeneisassociatedwithincreasedsurvivalintcelllymphoma
AT tianxiaobo variationindicergeneisassociatedwithincreasedsurvivalintcelllymphoma
AT zhangbo variationindicergeneisassociatedwithincreasedsurvivalintcelllymphoma
AT zhangyanqi variationindicergeneisassociatedwithincreasedsurvivalintcelllymphoma
AT chenjieping variationindicergeneisassociatedwithincreasedsurvivalintcelllymphoma