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QuickBundles, a Method for Tractography Simplification

Diffusion MR data sets produce large numbers of streamlines which are hard to visualize, interact with, and interpret in a clinically acceptable time scale, despite numerous proposed approaches. As a solution we present a simple, compact, tailor-made clustering algorithm, QuickBundles (QB), that ove...

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Autores principales: Garyfallidis, Eleftherios, Brett, Matthew, Correia, Marta Morgado, Williams, Guy B., Nimmo-Smith, Ian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3518823/
https://www.ncbi.nlm.nih.gov/pubmed/23248578
http://dx.doi.org/10.3389/fnins.2012.00175
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author Garyfallidis, Eleftherios
Brett, Matthew
Correia, Marta Morgado
Williams, Guy B.
Nimmo-Smith, Ian
author_facet Garyfallidis, Eleftherios
Brett, Matthew
Correia, Marta Morgado
Williams, Guy B.
Nimmo-Smith, Ian
author_sort Garyfallidis, Eleftherios
collection PubMed
description Diffusion MR data sets produce large numbers of streamlines which are hard to visualize, interact with, and interpret in a clinically acceptable time scale, despite numerous proposed approaches. As a solution we present a simple, compact, tailor-made clustering algorithm, QuickBundles (QB), that overcomes the complexity of these large data sets and provides informative clusters in seconds. Each QB cluster can be represented by a single centroid streamline; collectively these centroid streamlines can be taken as an effective representation of the tractography. We provide a number of tests to show how the QB reduction has good consistency and robustness. We show how the QB reduction can help in the search for similarities across several subjects.
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spelling pubmed-35188232012-12-17 QuickBundles, a Method for Tractography Simplification Garyfallidis, Eleftherios Brett, Matthew Correia, Marta Morgado Williams, Guy B. Nimmo-Smith, Ian Front Neurosci Neuroscience Diffusion MR data sets produce large numbers of streamlines which are hard to visualize, interact with, and interpret in a clinically acceptable time scale, despite numerous proposed approaches. As a solution we present a simple, compact, tailor-made clustering algorithm, QuickBundles (QB), that overcomes the complexity of these large data sets and provides informative clusters in seconds. Each QB cluster can be represented by a single centroid streamline; collectively these centroid streamlines can be taken as an effective representation of the tractography. We provide a number of tests to show how the QB reduction has good consistency and robustness. We show how the QB reduction can help in the search for similarities across several subjects. Frontiers Media S.A. 2012-12-11 /pmc/articles/PMC3518823/ /pubmed/23248578 http://dx.doi.org/10.3389/fnins.2012.00175 Text en Copyright © 2012 Garyfallidis, Brett, Correia, Williams and Nimmo-Smith. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in other forums, provided the original authors and source are credited and subject to any copyright notices concerning any third-party graphics etc.
spellingShingle Neuroscience
Garyfallidis, Eleftherios
Brett, Matthew
Correia, Marta Morgado
Williams, Guy B.
Nimmo-Smith, Ian
QuickBundles, a Method for Tractography Simplification
title QuickBundles, a Method for Tractography Simplification
title_full QuickBundles, a Method for Tractography Simplification
title_fullStr QuickBundles, a Method for Tractography Simplification
title_full_unstemmed QuickBundles, a Method for Tractography Simplification
title_short QuickBundles, a Method for Tractography Simplification
title_sort quickbundles, a method for tractography simplification
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3518823/
https://www.ncbi.nlm.nih.gov/pubmed/23248578
http://dx.doi.org/10.3389/fnins.2012.00175
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