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Measuring Abnormal Brains: Building Normative Rules in Neuroimaging Using One-Class Support Vector Machines

Pattern recognition methods have demonstrated to be suitable analyses tools to handle the high dimensionality of neuroimaging data. However, most studies combining neuroimaging with pattern recognition methods focus on two-class classification problems, usually aiming to discriminate patients under...

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Autores principales: Sato, João Ricardo, Rondina, Jane Maryam, Mourão-Miranda, Janaina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3521128/
https://www.ncbi.nlm.nih.gov/pubmed/23248579
http://dx.doi.org/10.3389/fnins.2012.00178
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author Sato, João Ricardo
Rondina, Jane Maryam
Mourão-Miranda, Janaina
author_facet Sato, João Ricardo
Rondina, Jane Maryam
Mourão-Miranda, Janaina
author_sort Sato, João Ricardo
collection PubMed
description Pattern recognition methods have demonstrated to be suitable analyses tools to handle the high dimensionality of neuroimaging data. However, most studies combining neuroimaging with pattern recognition methods focus on two-class classification problems, usually aiming to discriminate patients under a specific condition (e.g., Alzheimer’s disease) from healthy controls. In this perspective paper we highlight the potential of the one-class support vector machines (OC-SVM) as an unsupervised or exploratory approach that can be used to create normative rules in a multivariate sense. In contrast with the standard SVM that finds an optimal boundary separating two classes (discriminating boundary), the OC-SVM finds the boundary enclosing a specific class (characteristic boundary). If the OC-SVM is trained with patterns of healthy control subjects, the distance to the boundary can be interpreted as an abnormality score. This score might allow quantification of symptom severity or provide insights about subgroups of patients. We provide an intuitive description of basic concepts in one-class classification, the foundations of OC-SVM, current applications, and discuss how this tool can bring new insights to neuroimaging studies.
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spelling pubmed-35211282012-12-17 Measuring Abnormal Brains: Building Normative Rules in Neuroimaging Using One-Class Support Vector Machines Sato, João Ricardo Rondina, Jane Maryam Mourão-Miranda, Janaina Front Neurosci Neuroscience Pattern recognition methods have demonstrated to be suitable analyses tools to handle the high dimensionality of neuroimaging data. However, most studies combining neuroimaging with pattern recognition methods focus on two-class classification problems, usually aiming to discriminate patients under a specific condition (e.g., Alzheimer’s disease) from healthy controls. In this perspective paper we highlight the potential of the one-class support vector machines (OC-SVM) as an unsupervised or exploratory approach that can be used to create normative rules in a multivariate sense. In contrast with the standard SVM that finds an optimal boundary separating two classes (discriminating boundary), the OC-SVM finds the boundary enclosing a specific class (characteristic boundary). If the OC-SVM is trained with patterns of healthy control subjects, the distance to the boundary can be interpreted as an abnormality score. This score might allow quantification of symptom severity or provide insights about subgroups of patients. We provide an intuitive description of basic concepts in one-class classification, the foundations of OC-SVM, current applications, and discuss how this tool can bring new insights to neuroimaging studies. Frontiers Media S.A. 2012-12-13 /pmc/articles/PMC3521128/ /pubmed/23248579 http://dx.doi.org/10.3389/fnins.2012.00178 Text en Copyright © 2012 Sato, Rondina and Mourão-Miranda. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in other forums, provided the original authors and source are credited and subject to any copyright notices concerning any third-party graphics etc.
spellingShingle Neuroscience
Sato, João Ricardo
Rondina, Jane Maryam
Mourão-Miranda, Janaina
Measuring Abnormal Brains: Building Normative Rules in Neuroimaging Using One-Class Support Vector Machines
title Measuring Abnormal Brains: Building Normative Rules in Neuroimaging Using One-Class Support Vector Machines
title_full Measuring Abnormal Brains: Building Normative Rules in Neuroimaging Using One-Class Support Vector Machines
title_fullStr Measuring Abnormal Brains: Building Normative Rules in Neuroimaging Using One-Class Support Vector Machines
title_full_unstemmed Measuring Abnormal Brains: Building Normative Rules in Neuroimaging Using One-Class Support Vector Machines
title_short Measuring Abnormal Brains: Building Normative Rules in Neuroimaging Using One-Class Support Vector Machines
title_sort measuring abnormal brains: building normative rules in neuroimaging using one-class support vector machines
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3521128/
https://www.ncbi.nlm.nih.gov/pubmed/23248579
http://dx.doi.org/10.3389/fnins.2012.00178
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