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Contrasting extracellular enzyme activities of particle-associated bacteria from distinct provinces of the North Atlantic Ocean
Microbial communities play a key role in the marine carbon cycle, processing much of phytoplankton-derived organic matter. The composition of these communities varies by depth, season, and location in the ocean; the functional consequences of these compositional variations for the carbon cycle are o...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2012
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3521168/ https://www.ncbi.nlm.nih.gov/pubmed/23248623 http://dx.doi.org/10.3389/fmicb.2012.00425 |
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author | Arnosti, Carol Fuchs, Bernhard M. Amann, Rudolf Passow, Uta |
author_facet | Arnosti, Carol Fuchs, Bernhard M. Amann, Rudolf Passow, Uta |
author_sort | Arnosti, Carol |
collection | PubMed |
description | Microbial communities play a key role in the marine carbon cycle, processing much of phytoplankton-derived organic matter. The composition of these communities varies by depth, season, and location in the ocean; the functional consequences of these compositional variations for the carbon cycle are only beginning to be explored. We measured the abilities of microbial communities in the large-particle fraction (retained by a 10-μm pore-size cartridge filter) to enzymatically hydrolyze high molecular weight substrates, and therefore initiate carbon remineralization in four distinct oceanic provinces: the boreal polar (BPLR), the Arctic oceanic (ARCT), the North Atlantic drift (NADR), and the North Atlantic subtropical (NAST) provinces. Since we expected the large-particle fraction to include phytoplankton cells, we measured the hydrolysis of polysaccharide substrates (laminarin, fucoidan, xylan, and chondroitin sulfate) expected to be associated with phytoplankton. Hydrolysis rates and patterns clustered into two groups, the BPLR/ARCT and the NADR/NAST. All four substrates were hydrolyzed by the BPLR/ARCT communities; hydrolysis rates of individual substrate varied by factors of ca. 1–4. In contrast, chondroitin was not hydrolyzed in the NADR/NAST, and hydrolytic activity was dominated by laminarinase. Fluorescence in situ hybridization of the large-particle fraction post-incubation showed a substantial contribution (15–26%) of CF319a-positive cells (Bacteroidetes) to total DAPI-stainable cells. Concurrent studies of microbial community composition and of fosmids from these same stations also demonstrated similarities between BPLR and ARCT stations, which were distinct from the NADR/NAST stations. Together, these data support a picture of compositionally as well as functionally distinct communities across these oceanic provinces. |
format | Online Article Text |
id | pubmed-3521168 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-35211682012-12-17 Contrasting extracellular enzyme activities of particle-associated bacteria from distinct provinces of the North Atlantic Ocean Arnosti, Carol Fuchs, Bernhard M. Amann, Rudolf Passow, Uta Front Microbiol Microbiology Microbial communities play a key role in the marine carbon cycle, processing much of phytoplankton-derived organic matter. The composition of these communities varies by depth, season, and location in the ocean; the functional consequences of these compositional variations for the carbon cycle are only beginning to be explored. We measured the abilities of microbial communities in the large-particle fraction (retained by a 10-μm pore-size cartridge filter) to enzymatically hydrolyze high molecular weight substrates, and therefore initiate carbon remineralization in four distinct oceanic provinces: the boreal polar (BPLR), the Arctic oceanic (ARCT), the North Atlantic drift (NADR), and the North Atlantic subtropical (NAST) provinces. Since we expected the large-particle fraction to include phytoplankton cells, we measured the hydrolysis of polysaccharide substrates (laminarin, fucoidan, xylan, and chondroitin sulfate) expected to be associated with phytoplankton. Hydrolysis rates and patterns clustered into two groups, the BPLR/ARCT and the NADR/NAST. All four substrates were hydrolyzed by the BPLR/ARCT communities; hydrolysis rates of individual substrate varied by factors of ca. 1–4. In contrast, chondroitin was not hydrolyzed in the NADR/NAST, and hydrolytic activity was dominated by laminarinase. Fluorescence in situ hybridization of the large-particle fraction post-incubation showed a substantial contribution (15–26%) of CF319a-positive cells (Bacteroidetes) to total DAPI-stainable cells. Concurrent studies of microbial community composition and of fosmids from these same stations also demonstrated similarities between BPLR and ARCT stations, which were distinct from the NADR/NAST stations. Together, these data support a picture of compositionally as well as functionally distinct communities across these oceanic provinces. Frontiers Media S.A. 2012-12-13 /pmc/articles/PMC3521168/ /pubmed/23248623 http://dx.doi.org/10.3389/fmicb.2012.00425 Text en Copyright © Arnosti, Fuchs, Amann and Passow. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in other forums, provided the original authors and source are credited and subject to any copyright notices concerning any third-party graphics etc. |
spellingShingle | Microbiology Arnosti, Carol Fuchs, Bernhard M. Amann, Rudolf Passow, Uta Contrasting extracellular enzyme activities of particle-associated bacteria from distinct provinces of the North Atlantic Ocean |
title | Contrasting extracellular enzyme activities of particle-associated bacteria from distinct provinces of the North Atlantic Ocean |
title_full | Contrasting extracellular enzyme activities of particle-associated bacteria from distinct provinces of the North Atlantic Ocean |
title_fullStr | Contrasting extracellular enzyme activities of particle-associated bacteria from distinct provinces of the North Atlantic Ocean |
title_full_unstemmed | Contrasting extracellular enzyme activities of particle-associated bacteria from distinct provinces of the North Atlantic Ocean |
title_short | Contrasting extracellular enzyme activities of particle-associated bacteria from distinct provinces of the North Atlantic Ocean |
title_sort | contrasting extracellular enzyme activities of particle-associated bacteria from distinct provinces of the north atlantic ocean |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3521168/ https://www.ncbi.nlm.nih.gov/pubmed/23248623 http://dx.doi.org/10.3389/fmicb.2012.00425 |
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