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Diagnosis of Brugian Filariasis by Loop-Mediated Isothermal Amplification

In this study we developed and evaluated a Brugia Hha I repeat loop-mediated isothermal amplification (LAMP) assay for the rapid detection of Brugia genomic DNA. Amplification was detected using turbidity or fluorescence as readouts. Reactions generated a turbidity threshold value or a clear visual...

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Detalles Bibliográficos
Autores principales: Poole, Catherine B., Tanner, Nathan A., Zhang, Yinhua, Evans, Thomas C., Carlow, Clotilde K. S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3521703/
https://www.ncbi.nlm.nih.gov/pubmed/23272258
http://dx.doi.org/10.1371/journal.pntd.0001948
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author Poole, Catherine B.
Tanner, Nathan A.
Zhang, Yinhua
Evans, Thomas C.
Carlow, Clotilde K. S.
author_facet Poole, Catherine B.
Tanner, Nathan A.
Zhang, Yinhua
Evans, Thomas C.
Carlow, Clotilde K. S.
author_sort Poole, Catherine B.
collection PubMed
description In this study we developed and evaluated a Brugia Hha I repeat loop-mediated isothermal amplification (LAMP) assay for the rapid detection of Brugia genomic DNA. Amplification was detected using turbidity or fluorescence as readouts. Reactions generated a turbidity threshold value or a clear visual positive within 30 minutes using purified genomic DNA equivalent to one microfilaria. Similar results were obtained using DNA isolated from blood samples containing B. malayi microfilariae. Amplification was specific to B. malayi and B. timori, as no turbidity was observed using DNA from the related filarial parasites Wuchereria bancrofti, Onchocerca volvulus or Dirofilaria immitis, or from human or mosquito. Furthermore, the assay was most robust using a new strand-displacing DNA polymerase termed Bst 2.0 compared to wild-type Bst DNA polymerase, large fragment. The results indicate that the Brugia Hha I repeat LAMP assay is rapid, sensitive and Brugia-specific with the potential to be developed further as a field tool for diagnosis and mapping of brugian filariasis.
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spelling pubmed-35217032012-12-27 Diagnosis of Brugian Filariasis by Loop-Mediated Isothermal Amplification Poole, Catherine B. Tanner, Nathan A. Zhang, Yinhua Evans, Thomas C. Carlow, Clotilde K. S. PLoS Negl Trop Dis Research Article In this study we developed and evaluated a Brugia Hha I repeat loop-mediated isothermal amplification (LAMP) assay for the rapid detection of Brugia genomic DNA. Amplification was detected using turbidity or fluorescence as readouts. Reactions generated a turbidity threshold value or a clear visual positive within 30 minutes using purified genomic DNA equivalent to one microfilaria. Similar results were obtained using DNA isolated from blood samples containing B. malayi microfilariae. Amplification was specific to B. malayi and B. timori, as no turbidity was observed using DNA from the related filarial parasites Wuchereria bancrofti, Onchocerca volvulus or Dirofilaria immitis, or from human or mosquito. Furthermore, the assay was most robust using a new strand-displacing DNA polymerase termed Bst 2.0 compared to wild-type Bst DNA polymerase, large fragment. The results indicate that the Brugia Hha I repeat LAMP assay is rapid, sensitive and Brugia-specific with the potential to be developed further as a field tool for diagnosis and mapping of brugian filariasis. Public Library of Science 2012-12-13 /pmc/articles/PMC3521703/ /pubmed/23272258 http://dx.doi.org/10.1371/journal.pntd.0001948 Text en © 2012 Poole et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Poole, Catherine B.
Tanner, Nathan A.
Zhang, Yinhua
Evans, Thomas C.
Carlow, Clotilde K. S.
Diagnosis of Brugian Filariasis by Loop-Mediated Isothermal Amplification
title Diagnosis of Brugian Filariasis by Loop-Mediated Isothermal Amplification
title_full Diagnosis of Brugian Filariasis by Loop-Mediated Isothermal Amplification
title_fullStr Diagnosis of Brugian Filariasis by Loop-Mediated Isothermal Amplification
title_full_unstemmed Diagnosis of Brugian Filariasis by Loop-Mediated Isothermal Amplification
title_short Diagnosis of Brugian Filariasis by Loop-Mediated Isothermal Amplification
title_sort diagnosis of brugian filariasis by loop-mediated isothermal amplification
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3521703/
https://www.ncbi.nlm.nih.gov/pubmed/23272258
http://dx.doi.org/10.1371/journal.pntd.0001948
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