Cargando…

T-Cell Receptors Binding Orientation over Peptide/MHC Class I Is Driven by Long-Range Interactions

Crystallographic data about T-Cell Receptor – peptide – major histocompatibility complex class I (TCRpMHC) interaction have revealed extremely diverse TCR binding modes triggering antigen recognition. Understanding the molecular basis that governs TCR orientation over pMHC is still a considerable ch...

Descripción completa

Detalles Bibliográficos
Autores principales:	Ferber, Mathias, Zoete, Vincent, Michielin, Olivier
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2012
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3522592/ https://www.ncbi.nlm.nih.gov/pubmed/23251658 http://dx.doi.org/10.1371/journal.pone.0051943

Ejemplares similares

Prediction of MHC class I binding peptides, using SVMHC
por: Dönnes, Pierre, et al.
Publicado: (2002)

Dynamically Driven Allostery in MHC Proteins: Peptide-Dependent Tuning of Class I MHC Global Flexibility
por: Ayres, Cory M., et al.
Publicado: (2019)

Improving peptide-MHC class I binding prediction for unbalanced datasets
por: Sales, Ana Paula, et al.
Publicado: (2008)

CapsNet-MHC predicts peptide-MHC class I binding based on capsule neural networks
por: Kalemati, Mahmood, et al.
Publicado: (2023)

Prediction of MHC class I binding peptides using probability distribution functions
por: Soam, Sudhir Singh, et al.
Publicado: (2009)

Binding peptide generation for MHC Class I proteins with deep reinforcement learning
por: Chen, Ziqi, et al.
Publicado: (2023)

Motifs and supermotifs for MHC class II binding peptides
Publicado: (1995)

Evaluation of MHC class I peptide binding prediction servers: Applications for vaccine research
por: Lin, Hong Huang, et al.
Publicado: (2008)

Amino acid biophysical properties in the statistical prediction of peptide-MHC class I binding
por: Ray, Surajit, et al.
Publicado: (2007)

Prediction of peptides binding to MHC class I and II alleles by temporal motif mining
por: Meydan, Cem, et al.
Publicado: (2013)

Expression levels of MHC class I molecules are inversely correlated with promiscuity of peptide binding
por: Chappell, Paul E, et al.
Publicado: (2015)

The MHC class I peptide repertoire is molded by the transcriptome
por: Fortier, Marie-Hélène, et al.
Publicado: (2008)

Reduced bonobo MHC class I diversity predicts a reduced viral peptide binding ability compared to chimpanzees
por: Maibach, Vincent, et al.
Publicado: (2019)

Apparent lack of MHC restriction in binding of class I HLA molecules to solid-phase peptides
Publicado: (1990)

Porcine major histocompatibility complex (MHC) class I molecules and analysis of their peptide-binding specificities
por: Pedersen, Lasse Eggers, et al.
Publicado: (2011)

Deep convolutional neural networks for pan-specific peptide-MHC class I binding prediction
por: Han, Youngmahn, et al.
Publicado: (2017)

Ranking-Based Convolutional Neural Network Models for Peptide-MHC Class I Binding Prediction
por: Chen, Ziqi, et al.
Publicado: (2021)

Non-conventional sources of peptides presented by MHC class I
por: Starck, Shelley R., et al.
Publicado: (2011)

Properties of MHC Class I Presented Peptides That Enhance Immunogenicity
por: Calis, Jorg J. A., et al.
Publicado: (2013)

Malaria-driven adaptation of MHC class I in wild bonobo populations
por: Wroblewski, Emily E., et al.
Publicado: (2023)

MHCAttnNet: predicting MHC-peptide bindings for MHC alleles classes I and II using an attention-based deep neural model
por: Venkatesh, Gopalakrishnan, et al.
Publicado: (2020)

A Peptide Filtering Relation Quantifies MHC Class I Peptide Optimization
por: Dalchau, Neil, et al.
Publicado: (2011)

Impact of genomic polymorphisms on the repertoire of human MHC class I-associated peptides
por: Granados, Diana Paola, et al.
Publicado: (2014)

The Utility of Supertype Clustering in Prediction for Class II MHC-Peptide Binding
por: Shen, Wen-Jun, et al.
Publicado: (2018)

In silico design of MHC class I high binding affinity peptides through motifs activation map
por: Xiao, Zhoujian, et al.
Publicado: (2018)

MHCVision: estimation of global and local false discovery rate for MHC class I peptide binding prediction
por: Pearngam, Phorutai, et al.
Publicado: (2021)

The strength of selection is consistent across both domains of the MHC class I peptide-binding groove in birds
por: Minias, Piotr, et al.
Publicado: (2021)

Scrutinizing MHC-I Binding Peptides and Their Limits of Variation
por: Koch, Christian P., et al.
Publicado: (2013)

MHC class I multimers
por: Sun, Mei-Yi, et al.
Publicado: (2001)

Identical peptides recognized by MHC class I- and II-restricted T cells
Publicado: (1989)

Class I MHC can present an endogenous peptide to cytotoxic T lymphocytes
Publicado: (1989)

ER stress affects processing of MHC class I-associated peptides
por: Granados, Diana P, et al.
Publicado: (2009)

Neuronal MHC Class I Expression Is Regulated by Activity Driven Calcium Signaling
por: Lv, Dan, et al.
Publicado: (2015)

MHC class I diversity in chimpanzees and bonobos
por: Maibach, Vincent, et al.
Publicado: (2017)

Salt bridge-forming residues positioned over viral peptides presented by MHC class I impacts T-cell recognition in a binding-dependent manner
por: Ji, Wei, et al.
Publicado: (2019)

TCRep 3D: An Automated In Silico Approach to Study the Structural Properties of TCR Repertoires
por: Leimgruber, Antoine, et al.
Publicado: (2011)

KIR Polymorphisms Modulate Peptide-Dependent Binding to an MHC Class I Ligand with a Bw6 Motif
por: Colantonio, Arnaud D., et al.
Publicado: (2011)

Prediction of MHC class II binding peptides based on an iterative learning model
por: Murugan, Naveen, et al.
Publicado: (2005)

Limitations of Ab Initio Predictions of Peptide Binding to MHC Class II Molecules
por: Zhang, Hao, et al.
Publicado: (2010)

Citrullination only infrequently impacts peptide binding to HLA class II MHC
por: Sidney, John, et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_650te9i3fave7iah5s4s7b3tal