A review of software for microarray genotyping

The focus of this review is software for the genotyping of microarray single nucleotide polymorphisms, in particular software for Affymetrix and Illumina arrays. Different statistical principles and ideas have been applied to the construction of genotyping algorithms -- for example, likelihood versu...

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Detalles Bibliográficos
Autores principales: Lamy, Philippe, Grove, Jakob, Wiuf, Carsten
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2011
Materias:
Software Review
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3525235/
https://www.ncbi.nlm.nih.gov/pubmed/21712191
http://dx.doi.org/10.1186/1479-7364-5-4-304
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author Lamy, Philippe
Grove, Jakob
Wiuf, Carsten
author_facet Lamy, Philippe
Grove, Jakob
Wiuf, Carsten
author_sort Lamy, Philippe
collection PubMed
description The focus of this review is software for the genotyping of microarray single nucleotide polymorphisms, in particular software for Affymetrix and Illumina arrays. Different statistical principles and ideas have been applied to the construction of genotyping algorithms -- for example, likelihood versus Bayesian modelling, and whether to genotype one or all arrays at a time. The release of new arrays is generally followed by new, or updated, algorithms.
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spelling pubmed-35252352012-12-19 A review of software for microarray genotyping Lamy, Philippe Grove, Jakob Wiuf, Carsten Hum Genomics Software Review The focus of this review is software for the genotyping of microarray single nucleotide polymorphisms, in particular software for Affymetrix and Illumina arrays. Different statistical principles and ideas have been applied to the construction of genotyping algorithms -- for example, likelihood versus Bayesian modelling, and whether to genotype one or all arrays at a time. The release of new arrays is generally followed by new, or updated, algorithms. BioMed Central 2011-05-01 /pmc/articles/PMC3525235/ /pubmed/21712191 http://dx.doi.org/10.1186/1479-7364-5-4-304 Text en Copyright ©2011 Henry Stewart Publications
spellingShingle Software Review
Lamy, Philippe
Grove, Jakob
Wiuf, Carsten
A review of software for microarray genotyping
title A review of software for microarray genotyping
title_full A review of software for microarray genotyping
title_fullStr A review of software for microarray genotyping
title_full_unstemmed A review of software for microarray genotyping
title_short A review of software for microarray genotyping
title_sort review of software for microarray genotyping
topic Software Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3525235/
https://www.ncbi.nlm.nih.gov/pubmed/21712191
http://dx.doi.org/10.1186/1479-7364-5-4-304
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